RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 TEDDM1Q5T9Z0 273 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 ZNF470Q6ECI4 717 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 NEPROQ6NW34 567 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 ESRP1Q6NXG1 681 aaKnown RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 CES3Q6UWW8 571 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 USP45Q70EL2 814 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 SDCCAG8Q86SQ7 713 aaPredicted RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 TAX1BP1Q86VP1 789 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 MFSD6LQ8IWD5 586 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 TRIM42Q8IWZ5 723 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 C4orf33Q8N1A6 199 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 ANKRD42Q8N9B4 389 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 KDM1BQ8NB78 822 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 RIN3Q8TB24 985 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 THAP11Q96EK4 314 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 TSPAN17Q96FV3 270 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 LRIG1Q96JA1 1093 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 ZNF641Q96N77 438 aaPredicted RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 TRIM56Q9BRZ2 755 aaKnown RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 OSBPL1AQ9BXW6 950 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 OSBPL6Q9BZF3 934 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 LINC00597Q9H2U6 94 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 RHOJQ9H4E5 214 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 CCDC134Q9H6E4 229 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 MAGEE1Q9HCI5 957 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 PRDM9Q9NQV7 894 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 SMYD2Q9NRG4 433 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 NLE1Q9NVX2 485 aaPredicted RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 DEC1Q9P2X7 70 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 MID2Q9UJV3 735 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 FBXO10Q9UK96 956 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 INTS6Q9UL03 887 aaKnown RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 CA14Q9ULX7 337 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 ERVW-1Q9UQF0 538 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 ACTL7AQ9Y615 435 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 COL4A3Q01955 1670 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 MUC22E2RYF6 1773 aaPredicted RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 TICRRQ7Z2Z1 1910 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 TTC24A2A3L6 582 aaPredicted RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 STX7O15400 261 aaKnown RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 HTRA2O43464 458 aaPredicted RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 LDB2O43679 373 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 TULP3O75386 442 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 MT-CO1P00395 513 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 GSTA1P08263 222 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 DLDP09622 509 aaKnown RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 PSMC3P17980 439 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 ARCN1P48444 511 aaKnown RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 NUMBP49757 651 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 ZNF140P52738 457 aaPredicted RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 SLC12A2P55011 1212 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 FCHO2Q0JRZ9 810 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 DLG2Q15700 870 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 CNGA3Q16281 694 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 DBN1Q16643 649 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 QPCTQ16769 361 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 INSCQ1MX18 579 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 MYLK3Q32MK0 819 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 RNF187Q5TA31 235 aaPredicted RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 MROH9Q5TGP6 573 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 ZDHHC20Q5W0Z9 365 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 BRAT1Q6PJG6 821 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 ADIPOR2Q86V24 386 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 BANPQ8N9N5 519 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 C2CD4AQ8NCU7 369 aaPredicted RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 GPR150Q8NGU9 434 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 OR6P1Q8NGX9 317 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 SREK1Q8WXA9 508 aaKnown RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 VPS39Q96JC1 886 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 TTC1Q99614 292 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 GPR22Q99680 433 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 GPR63Q9BZJ6 419 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 FOXQ1Q9C009 403 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 CIPCQ9C0C6 399 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 EPN3Q9H201 632 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 ECT2Q9H8V3 914 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 PARD6AQ9NPB6 346 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 CATSPERZQ9NTU4 200 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 INTS10Q9NVR2 710 aaKnown RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 HECAQ9UBI9 543 aaPredicted RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 DCDC2Q9UHG0 476 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 EVLQ9UI08 416 aaPredicted RBP8.95□□□□□ -0.98
VPS50-207ENST00000458530 FBXO5Q9UKT4 447 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 CLEC4EQ9ULY5 219 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 PHTF1Q9UMS5 762 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 PLA2G4CQ9UP65 541 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 ANKRD6Q9Y2G4 727 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 ZNF711Q9Y462 761 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 PCDHB9Q9Y5E1 797 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 PCDHGC4Q9Y5F7 938 aa8.95□□□□□ -0.98
VPS50-207ENST00000458530 A0A1W2PPM1 405 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 KANSL1LA0AUZ9 987 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 CCDC78A2IDD5 438 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 CAPN8A6NHC0 703 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 SHISA7A6NL88 538 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 WASH3PC4AMC7 463 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 K7ERQ8 282 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 SMAD6O43541 496 aaKnown RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 TYROBPO43914 113 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 FZD6O60353 706 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms