RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 APOLD1Q96LR9 279 aa18.67■□□□□ 0.58
USP39-209ENST00000458268 LGR4Q9BXB1 951 aa18.67■□□□□ 0.58
USP39-209ENST00000458268 CYP4F12Q9HCS2 524 aa18.67■□□□□ 0.58
USP39-209ENST00000458268 LZTFL1Q9NQ48 299 aa18.67■□□□□ 0.58
USP39-209ENST00000458268 PHPT1Q9NRX4 125 aaPredicted RBP18.67■□□□□ 0.58
USP39-209ENST00000458268 NLGN3Q9NZ94 848 aa18.67■□□□□ 0.58
USP39-209ENST00000458268 SIRPGQ9P1W8 387 aa18.67■□□□□ 0.58
USP39-209ENST00000458268 SHOC2Q9UQ13 582 aa18.67■□□□□ 0.58
USP39-209ENST00000458268 CPED1A4D0V7 1026 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 C1QTNF9BB2RNN3 333 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 KRT86O43790 486 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 GCATO75600 419 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 TNFP01375 233 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 C1QTNF9P0C862 333 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 KELP23276 732 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 ACADVLP49748 655 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 BLKP51451 505 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 HK3P52790 923 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 KIAA1024LP59773 190 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 SHC2P98077 582 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 WASHC5Q12768 1159 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 NOMO1Q15155 1222 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 PROX2Q3B8N5 592 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 DARS2Q6PI48 645 aaKnown RBP18.66■□□□□ 0.58
USP39-209ENST00000458268 TRIM74Q86UV6 250 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 ZNF567Q8N184 647 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 SLC25A41Q8N5S1 370 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 OR56A4Q8NGH8 313 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 SPOCK2Q92563 424 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 TEKT5Q96M29 485 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 TSGA10Q9BZW7 698 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 ABCG8Q9H221 673 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 FGF22Q9HCT0 170 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 GULP1Q9UBP9 304 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 RSPH14Q9UHP6 348 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 PPIL1Q9Y3C6 166 aa18.66■□□□□ 0.58
USP39-209ENST00000458268 GOLGA6L3A6NEY3 463 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 MIF4GDA9UHW6 222 aaKnown RBP18.65■□□□□ 0.58
USP39-209ENST00000458268 HACD1B0YJ81 288 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 ANKRD66B4E2M5 251 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 PSMD11O00231 422 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 INPP4BO15327 924 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 MTSS1O43312 755 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 NRDCO43847 1150 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 ZNF30P17039 623 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 RPL26P61254 145 aaKnown RBP18.65■□□□□ 0.58
USP39-209ENST00000458268 PTSQ03393 145 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 CDK18Q07002 472 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 CDKN3Q16667 212 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 ALS2CLQ60I27 953 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 LYSMD3Q7Z3D4 306 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 CDKL3Q8IVW4 592 aaPredicted RBP18.65■□□□□ 0.58
USP39-209ENST00000458268 IPMKQ8NFU5 416 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 CCHCR1Q8TD31 782 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 FERMT1Q9BQL6 677 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 DUSP23Q9BVJ7 150 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 RIOK2Q9BVS4 552 aaKnown RBP18.65■□□□□ 0.58
USP39-209ENST00000458268 CLPBQ9H078 707 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 SYNDIG1Q9H7V2 258 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 GRPEL1Q9HAV7 217 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 DNPEPQ9ULA0 475 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 RPL26L1Q9UNX3 145 aaKnown RBP18.65■□□□□ 0.58
USP39-209ENST00000458268 WASF3Q9UPY6 502 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 NEUROG3Q9Y4Z2 214 aa18.65■□□□□ 0.58
USP39-209ENST00000458268 GOLGA6L9A6NEM1 432 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 KCNN4O15554 427 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 TJP3O95049 919 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 ASMTLO95671 621 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 GIMD1P0DJR0 217 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 RBP3P10745 1247 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 MYCLP1P12525 358 aaPredicted RBP18.64■□□□□ 0.57
USP39-209ENST00000458268 CD68P34810 354 aaPredicted RBP18.64■□□□□ 0.57
USP39-209ENST00000458268 STC1P52823 247 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 ELOCQ15369 112 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 ZCCHC8Q6NZY4 707 aaKnown RBP18.64■□□□□ 0.57
USP39-209ENST00000458268 UNQ6494/PRO21346Q6UXR6 183 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 MARK2Q7KZI7 788 aaKnown RBP18.64■□□□□ 0.57
USP39-209ENST00000458268 TECPR1Q7Z6L1 1165 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 TAF8Q7Z7C8 310 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 LRRC8AQ8IWT6 810 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 AGAP2Q99490 1192 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 GPR63Q9BZJ6 419 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 CARS2Q9HA77 564 aaKnown RBP18.64■□□□□ 0.57
USP39-209ENST00000458268 EVA1BQ9NVM1 165 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 KCTD5Q9NXV2 234 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 PKD2L2Q9NZM6 624 aa18.64■□□□□ 0.57
USP39-209ENST00000458268 PLXNB3Q9ULL4 1909 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 PDE2AO00408 941 aaPredicted RBP18.63■□□□□ 0.57
USP39-209ENST00000458268 YY2O15391 372 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 DDX3YO15523 660 aaKnown RBP18.63■□□□□ 0.57
USP39-209ENST00000458268 STK10O94804 968 aaKnown RBP18.63■□□□□ 0.57
USP39-209ENST00000458268 CCDC175P0C221 793 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 GNPDA1P46926 289 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 POLD2P49005 469 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 CDK3Q00526 305 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 SEL1L2Q5TEA6 688 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 FSTL5Q8N475 847 aaPredicted RBP18.63■□□□□ 0.57
USP39-209ENST00000458268 SCG3Q8WXD2 468 aaKnown RBP18.63■□□□□ 0.57
USP39-209ENST00000458268 FAM153AQ9UHL3 310 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 TMEM98Q9Y2Y6 226 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms