RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 ARSDP51689 593 aa14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 NDST2P52849 883 aa14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 GSCP56915 257 aaPredicted RBP14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 TPI1P60174 286 aa14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 BECN1Q14457 450 aa14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 NRROSQ86YC3 692 aa14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 TSEN2Q8NCE0 465 aaKnown RBP14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 DPYSL5Q9BPU6 564 aa14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 CINPQ9BW66 212 aaPredicted RBP14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 PHPT1Q9NRX4 125 aaPredicted RBP14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 SLC39A1Q9NY26 324 aa14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 B3GALT1Q9Y5Z6 326 aa14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 COL12A1Q99715 3063 aa14.35□□□□□ -0.11
UPF3AP2-201ENST00000457924 SIGLEC16A6NMB1 481 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 CCP110O43303 1012 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 CALB1P05937 261 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 UNGP13051 313 aaPredicted RBP14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 GM2AP17900 193 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 HTR7P34969 479 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 GNPDA1P46926 289 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 RGRP47804 291 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 PAPOLAP51003 745 aaKnown RBP14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 ZNF143P52747 638 aaPredicted RBP14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 PTP4A2Q12974 167 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 IGFBP7Q16270 282 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 DCAF12Q5T6F0 453 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 NKAIN2Q5VXU1 208 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 SLC30A9Q6PML9 568 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 HEATR4Q86WZ0 1026 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 PELI3Q8N2H9 469 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 C3orf20Q8ND61 904 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 C9orf43Q8TAL5 461 aaPredicted RBP14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 NUS1Q96E22 293 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 CELF6Q96J87 481 aaKnown RBP14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 ZMYND15Q9H091 742 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 TRNAU1APQ9NX07 287 aaKnown RBP14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 KCTD5Q9NXV2 234 aa14.34□□□□□ -0.11
UPF3AP2-201ENST00000457924 RAD1O60671 282 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 CEACAM5P06731 702 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 THRAP10827 490 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 DESP17661 470 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 CR2P20023 1033 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 MPSTP25325 297 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 AK4P27144 223 aaPredicted RBP14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 ERCC5P28715 1186 aaPredicted RBP14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 SOX5P35711 763 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 RAB15P59190 212 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 NSUN2Q08J23 767 aaKnown RBP eCLIP14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 NCAPHQ15003 741 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 NR6A1Q15406 480 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 FAM129CQ86XR2 697 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 PHF13Q86YI8 300 aaPredicted RBP14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 NRSN1Q8IZ57 195 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 NAGSQ8N159 534 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 PATE1Q8WXA2 126 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 KIAA1143Q96AT1 154 aaPredicted RBP14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 COQ10AQ96MF6 247 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 TEX101Q9BY14 249 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 SLC39A8Q9C0K1 460 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 GPN2Q9H9Y4 310 aaPredicted RBP14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 SP110Q9HB58 689 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 ZNF71Q9NQZ8 489 aaPredicted RBP14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 OCIAD1Q9NX40 245 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 KCNK4Q9NYG8 393 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 SUFUQ9UMX1 484 aa14.33□□□□□ -0.12
UPF3AP2-201ENST00000457924 IGHV1OR21-1A0A087WYE8 117 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 EFCAB7A8K855 629 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 B4E171 279 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 TRAFD1O14545 582 aaPredicted RBP14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 PPM1DO15297 605 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 NKX2-8O15522 239 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 TSPAN7P41732 249 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 PPM1FP49593 454 aaPredicted RBP14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 SCNN1BP51168 640 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 POLR2FP61218 127 aaKnown RBP14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 CTBSQ01459 385 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 SQSTM1Q13501 440 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 RFTN1Q14699 578 aaPredicted RBP14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 SYCP1Q15431 976 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 DENND2CQ68D51 928 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 ANKS6Q68DC2 871 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 DNAJC24Q6P3W2 148 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 TMEM71Q6P5X7 295 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 SLC45A3Q96JT2 553 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 MCEEQ96PE7 176 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 TEFMQ96QE5 360 aaKnown RBP14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 PCDHB18PQ96TA0 734 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 EFHD1Q9BUP0 239 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 FRMD8Q9BZ67 464 aaPredicted RBP14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 GANQ9H2C0 597 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 B4GALT6Q9UBX8 382 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 DACH1Q9UI36 760 aa14.32□□□□□ -0.12
UPF3AP2-201ENST00000457924 A0A1W2PQ67 120 aa14.31□□□□□ -0.12
UPF3AP2-201ENST00000457924 GOLGA6CA6NDK9 693 aa14.31□□□□□ -0.12
UPF3AP2-201ENST00000457924 GOLGA6BA6NDN3 693 aa14.31□□□□□ -0.12
UPF3AP2-201ENST00000457924 EEF2KO00418 725 aaKnown RBP14.31□□□□□ -0.12
UPF3AP2-201ENST00000457924 FUCA1P04066 466 aa14.31□□□□□ -0.12
UPF3AP2-201ENST00000457924 GOLGA6DP0CG33 693 aa14.31□□□□□ -0.12
UPF3AP2-201ENST00000457924 PRKAR1AP10644 381 aa14.31□□□□□ -0.12
UPF3AP2-201ENST00000457924 NFKBIAP25963 317 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms