RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SELENOOQ9BVL4 669 aa4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 LGR4Q9BXB1 951 aa4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 ABCG4Q9H172 646 aa4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 NOL6Q9H6R4 1146 aaKnown RBP4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 MBNL1Q9NR56 388 aaKnown RBP4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 SEPT11Q9NVA2 429 aaKnown RBP4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 GPATCH2LQ9NWQ4 482 aa4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 ADAM22Q9P0K1 906 aa4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 PPARGC1AQ9UBK2 798 aaKnown RBP4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 SUCOQ9UBS9 1254 aaKnown RBP4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 TPX2Q9ULW0 747 aaKnown RBP4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 HPCAL4Q9UM19 191 aa4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 COQ6Q9Y2Z9 468 aa4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 PAXBP1Q9Y5B6 917 aa4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 ANKRD11Q6UB99 2663 aaPredicted RBP4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 COL27A1Q8IZC6 1860 aaPredicted RBP4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 LAMA5O15230 3695 aa4.75□□□□□ -1.65
GTF3C3-208ENST00000455546 ZFC3H1O60293 1989 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 SPTY2D1-AS1A0A0U1RR47 76 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 A0A1W2PNU3 283 aaPredicted RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 PMS2P1A4D2B8 440 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 NEMP2A6NFY4 417 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 SIGLEC16A6NMB1 481 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 EIF4E1BA6NMX2 242 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 A6NNZ2 444 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 A8MX80 341 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 TMCO5BA8MYB1 307 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 J3KR12 359 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 FPGTO14772 594 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 MUSKO15146 869 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 PDPK1O15530 556 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 CCP110O43303 1012 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 TSPAN6O43657 245 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 BUB1BO60566 1050 aaPredicted RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 RAMP2O60895 175 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 USP12O75317 370 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 CSO75390 466 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 TMCC1O94876 653 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 PIGNO95427 931 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 POP4O95707 220 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 CSF2P04141 144 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 ITGB2P05107 769 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 PRKCGP05129 697 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 CDK4P11802 303 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 CKMT1AP12532 417 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 KRT10P13645 584 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 CDK11BP21127 795 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 GPD1P21695 349 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 EPHB2P29323 1055 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 STAT1P42224 750 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 PTPN9P43378 593 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 ABCG1P45844 678 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 COPB1P53618 953 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 ADKP55263 362 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 HNRNPKP61978 463 aaKnown RBP eCLIP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 SNRPD1P62314 119 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 SLC7A5Q01650 507 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 OGDHQ02218 1023 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 UBXN1Q04323 297 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 ILKQ13418 452 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 SYCP1Q15431 976 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 CLEC16AQ2KHT3 1053 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 KLHL40Q2TBA0 621 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 FKBP15Q5T1M5 1219 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 FAXCQ5TGI0 409 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 CDKAL1Q5VV42 579 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 KIAA1161Q6NSJ0 714 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 GUSBP11Q6P575 273 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 GDPD4Q6W3E5 623 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 ZNF783Q6ZMS7 281 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 SPATC1Q76KD6 591 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 ARCQ7LC44 396 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 STRADAQ7RTN6 431 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 EFL1Q7Z2Z2 1120 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 RD3Q7Z3Z2 195 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 SLFN11Q7Z7L1 901 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 ZNF677Q86XU0 584 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 SPACA3Q8IXA5 215 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 DCBLD1Q8N8Z6 715 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 MSANTD4Q8NCY6 345 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 ZNF548Q8NEK5 533 aaPredicted RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 OR2AP1Q8NGE2 309 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 IFI44Q8TCB0 444 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 MAPK15Q8TD08 544 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 RFFLQ8WZ73 363 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 TSACCQ96A04 125 aaPredicted RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 FUBP1Q96AE4 644 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 NXPE2Q96DL1 559 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 TBC1D31Q96DN5 1066 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 HMCESQ96FZ2 354 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 PPP1R16AQ96I34 528 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 CELF6Q96J87 481 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 EXOC2Q96KP1 924 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 FCRL3Q96P31 734 aaPredicted RBP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 PSMG3-AS1Q96PY0 264 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 DNAJC7Q99615 494 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 IL12RB2Q99665 862 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 AGPAT1Q99943 283 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 DUSP23Q9BVJ7 150 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms