RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 FAXCQ5TGI0 409 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 PNCKQ6P2M8 343 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 NLRP8Q86W28 1048 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 NRSN1Q8IZ57 195 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 PELI3Q8N2H9 469 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 CCDC89Q8N998 374 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 MAGOHBQ96A72 148 aaKnown RBP27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 APOOQ9BUR5 198 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 GOLGA6AQ9NYA3 693 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 PAK5Q9P286 719 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 SHOC2Q9UQ13 582 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 CABIN1Q9Y6J0 2220 aa27.95■■■□□ 2.06
SMARCC1-203ENST00000454240 SPTY2D1-AS1A0A0U1RR47 76 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 A0A1B0GTQ1 180 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 SLC30A4O14863 429 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 PSMD3O43242 534 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 RPL22P35268 128 aaKnown RBP27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 FDFT1P37268 417 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 RXRGP48443 463 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 SPINT3P49223 89 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 PDE1CQ14123 709 aaPredicted RBP27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 RSPO4Q2I0M5 234 aaPredicted RBP27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 TTC27Q6P3X3 843 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 ZNF765Q7L2R6 523 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 OXR1Q8N573 874 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 ATL2Q8NHH9 583 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 ABCG8Q9H221 673 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 TRABDQ9H4I3 376 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 ETNK1Q9HBU6 452 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 ARNT2Q9HBZ2 717 aa27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 CDV3Q9UKY7 258 aaKnown RBP27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 TDRD6O60522 2096 aaKnown RBP27.94■■■□□ 2.06
SMARCC1-203ENST00000454240 RGSL1A5PLK6 1076 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 K7ESM1 405 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 ZSCAN5DPP0CG00 497 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 SDHBP21912 280 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 SLC14A1Q13336 389 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 FZD2Q14332 565 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 SHBQ15464 509 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 UAP1L1Q3KQV9 507 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 DENND5AQ6IQ26 1287 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 GSTA5Q7RTV2 222 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 CREG2Q8IUH2 290 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 TAB3Q8N5C8 712 aaPredicted RBP27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 PDCD7Q8N8D1 485 aaKnown RBP27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 TBL1YQ9BQ87 522 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 APOL2Q9BQE5 337 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 GPR63Q9BZJ6 419 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 LRRC40Q9H9A6 602 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 TM7SF3Q9NS93 570 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 PKD2L2Q9NZM6 624 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 HACD3Q9P035 362 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 CD84Q9UIB8 345 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 CEP250Q9BV73 2442 aa27.93■■■□□ 2.06
SMARCC1-203ENST00000454240 TM4SF5O14894 197 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 AURKAO14965 403 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 AP2A1O95782 977 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 TSHRP16473 764 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 PTK2BQ14289 1009 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 SPARCL1Q14515 664 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 C4orf22Q6V702 233 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 SCAMP4Q969E2 229 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 LRRC45Q96CN5 670 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 AP2M1Q96CW1 435 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 OR1A2Q9Y585 309 aa27.92■■■□□ 2.06
SMARCC1-203ENST00000454240 USP12O75317 370 aa27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 HOXC4P09017 264 aaPredicted RBP27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 TEAD1P28347 426 aa27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 COILP38432 576 aaPredicted RBP27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 CCT8P50990 548 aa27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 THOP1P52888 689 aa27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 MSLNQ13421 630 aaPredicted RBP27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 SEMA5AQ13591 1074 aa27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 TTC30BQ8N4P2 665 aa27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 FUBP1Q96AE4 644 aaKnown RBP27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 RAB6BQ9NRW1 208 aa27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 DLL3Q9NYJ7 618 aa27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 PCDHGB2Q9Y5G2 931 aa27.91■■■□□ 2.06
SMARCC1-203ENST00000454240 LRP4O75096 1905 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 GOLGA6L10A0A0M3HER8 536 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 ERI2A8K979 691 aaKnown RBP27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 PHF2O75151 1096 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 CD59P13987 128 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 HMGCLP35914 325 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 ARRB1P49407 418 aaPredicted RBP27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 CCDC137Q6PK04 289 aaKnown RBP27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 MACC1Q6ZN28 852 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 DBX2Q6ZNG2 339 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 NYAP1Q6ZVC0 841 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 PARGQ86W56 976 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 BLOC1S5Q8TDH9 187 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 TEX101Q9BY14 249 aa27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 FEZ2Q9UHY8 353 aaPredicted RBP27.9■■■□□ 2.06
SMARCC1-203ENST00000454240 YKT6O15498 198 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 PCDHGA12O60330 932 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 SOD1P00441 154 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 CASQ1P31415 396 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 KIAA1024LP59773 190 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 EIF2B5Q13144 721 aaKnown RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms