RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 TNRC6BQ9UPQ9 1833 aaKnown RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 PI4KAP42356 2102 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 RIF1Q5UIP0 2472 aaKnown RBP8.72□□□□□ -1.01
COL28A1-205ENST00000453441 PIEZO1Q92508 2521 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 PLK4O00444 970 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 FANCGO15287 622 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 PPFIA2O75334 1257 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 SUN1O94901 812 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 HEXIM1O94992 359 aaKnown RBP8.72□□□□□ -1.01
COL28A1-205ENST00000453441 MT-CYBP00156 380 aaPredicted RBP8.72□□□□□ -1.01
COL28A1-205ENST00000453441 PRLP01236 227 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 KRT14P02533 472 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 PDHA1P08559 390 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 TPSB2P20231 275 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 TEAD1P28347 426 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 ADRA1AP35348 466 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 MPLP40238 635 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 LMAN1P49257 510 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 LIG3P49916 1009 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 AFF3P51826 1226 aaKnown RBP8.72□□□□□ -1.01
COL28A1-205ENST00000453441 SARNPP82979 210 aaKnown RBP8.72□□□□□ -1.01
COL28A1-205ENST00000453441 RALGDSQ12967 914 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 TPSAB1Q15661 275 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 SLC1A5Q15758 541 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 PCSK7Q16549 785 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 DUOXA1Q1HG43 343 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 KCTD11Q693B1 232 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 RANBP10Q6VN20 620 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 LIPIQ6XZB0 460 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 ZNF765Q7L2R6 523 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 PCGF5Q86SE9 256 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 NLRP8Q86W28 1048 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 DCP2Q8IU60 420 aaKnown RBP8.72□□□□□ -1.01
COL28A1-205ENST00000453441 NRSN1Q8IZ57 195 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 RGL4Q8IZJ4 473 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 VWA5B2Q8N398 1253 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL28A1-205ENST00000453441 IPMKQ8NFU5 416 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 SNX19Q92543 992 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 NSMCE3Q96MG7 304 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 TBL1YQ9BQ87 522 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 SLC17A9Q9BYT1 436 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 ZDHHC5Q9C0B5 715 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 TIMMDC1Q9NPL8 285 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL28A1-205ENST00000453441 NCDNQ9UBB6 729 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 NFKBIL1Q9UBC1 381 aaPredicted RBP8.72□□□□□ -1.01
COL28A1-205ENST00000453441 HS3ST3A1Q9Y663 406 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 FAM186AA6NE01 2351 aa8.72□□□□□ -1.01
COL28A1-205ENST00000453441 CDC14CA4D256 554 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 PRR23AA6NEV1 266 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 NPIPB15A6NHN6 443 aaPredicted RBP8.71□□□□□ -1.02
COL28A1-205ENST00000453441 FPGTO14772 594 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 WNT9AO14904 365 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 BCAT2O15382 392 aaPredicted RBP8.71□□□□□ -1.02
COL28A1-205ENST00000453441 URI1O94763 535 aaPredicted RBP8.71□□□□□ -1.02
COL28A1-205ENST00000453441 METTL18O95568 372 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 CRTAMO95727 393 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 SYPP08247 313 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 ATXN1LP0C7T5 689 aaKnown RBP8.71□□□□□ -1.02
COL28A1-205ENST00000453441 C6P13671 934 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 RPL22P35268 128 aaKnown RBP8.71□□□□□ -1.02
COL28A1-205ENST00000453441 HNF1BP35680 557 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 PTGER3P43115 390 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 MAGEA6P43360 314 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 KCNJ1P48048 391 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 STC1P52823 247 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 DCDC1P59894 354 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 YPEL5P62699 121 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 PPP2CBP62714 309 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 PPP2CAP67775 309 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 CDH17Q12864 832 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 PTK6Q13882 451 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 IHHQ14623 411 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 STAT4Q14765 748 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 LRRC14Q15048 493 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 TLR1Q15399 786 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 PPP1R7Q15435 360 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 CNGA3Q16281 694 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 LRRC66Q68CR7 880 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 PDPK2PQ6A1A2 396 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 TTC27Q6P3X3 843 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 SLC23A3Q6PIS1 610 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 IL27RAQ6UWB1 636 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 KYAT3Q6YP21 454 aaKnown RBP8.71□□□□□ -1.02
COL28A1-205ENST00000453441 MAATS1Q7Z4T9 603 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 CBARPQ8N350 705 aaPredicted RBP8.71□□□□□ -1.02
COL28A1-205ENST00000453441 OXR1Q8N573 874 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 MFSD2AQ8NA29 543 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 TMEM145Q8NBT3 493 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 SPATA4Q8NEY3 305 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 C1orf216Q8TAB5 229 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 DTX3LQ8TDB6 740 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 RHBDD1Q8TEB9 315 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 PIGKQ92643 395 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 SERAC1Q96JX3 654 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 COQ10AQ96MF6 247 aa8.71□□□□□ -1.02
COL28A1-205ENST00000453441 WRAP53Q9BUR4 548 aaKnown RBP8.71□□□□□ -1.02
COL28A1-205ENST00000453441 FICDQ9BVA6 458 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms