RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 RNASEH2BQ5TBB1 312 aaKnown RBP15.68■□□□□ 0.1
VCX3B-204ENST00000453306 DUPD1Q68J44 220 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 CCNI2Q6ZMN8 369 aaPredicted RBP15.68■□□□□ 0.1
VCX3B-204ENST00000453306 KDM7AQ6ZMT4 941 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 DPPA4Q7L190 304 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 AGGF1Q8N302 714 aaeCLIP15.68■□□□□ 0.1
VCX3B-204ENST00000453306 PNPLA1Q8N8W4 532 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 NAT8LQ8N9F0 302 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 OR52K1Q8NGK4 314 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 KLK6Q92876 244 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 PWWP2AQ96N64 755 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 TBL1YQ9BQ87 522 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 CCDC86Q9H6F5 360 aaKnown RBP15.68■□□□□ 0.1
VCX3B-204ENST00000453306 SGK2Q9HBY8 427 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 CASS4Q9NQ75 786 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 DYRK4Q9NR20 520 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 HAUS2Q9NVX0 235 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 RPL26L1Q9UNX3 145 aaKnown RBP15.68■□□□□ 0.1
VCX3B-204ENST00000453306 NCKAP1Q9Y2A7 1128 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 SNX24Q9Y343 169 aa15.68■□□□□ 0.1
VCX3B-204ENST00000453306 WDFY3Q8IZQ1 3526 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 A0A1B0GVT2 93 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 A0A1W2PQU0 124 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 CTAGE15A4D2H0 777 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 FAM187AA6NFU0 413 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 IGLON5A6NGN9 336 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 CAPN8A6NHC0 703 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 WNT9AO14904 365 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 RNGTTO60942 597 aaKnown RBP15.67■□□□□ 0.1
VCX3B-204ENST00000453306 CTAGE8P0CG41 777 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 ADCY8P40145 1251 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 BASP1P80723 227 aaKnown RBP15.67■□□□□ 0.1
VCX3B-204ENST00000453306 PTSQ03393 145 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 MTM1Q13496 603 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 PTPRCAPQ14761 206 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 CNGA3Q16281 694 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 ZNF284Q2VY69 593 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 C4orf22Q6V702 233 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 LIPIQ6XZB0 460 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 SYDE1Q6ZW31 735 aaPredicted RBP15.67■□□□□ 0.1
VCX3B-204ENST00000453306 HSD11B1LQ7Z5J1 315 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 CTAGE6Q86UF2 777 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 CAND1Q86VP6 1230 aaKnown RBP15.67■□□□□ 0.1
VCX3B-204ENST00000453306 CTAGE4Q8IX94 777 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 TTC30BQ8N4P2 665 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 OR2T34Q8NGX1 318 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 C1orf216Q8TAB5 229 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 RHBDD1Q8TEB9 315 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 FUBP1Q96AE4 644 aaKnown RBP15.67■□□□□ 0.1
VCX3B-204ENST00000453306 RAB7BQ96AH8 199 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 IFT43Q96FT9 208 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 RUNDC3BQ96NL0 473 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 LYSMD1Q96S90 227 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 ERP44Q9BS26 406 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 WRAP53Q9BUR4 548 aaKnown RBP15.67■□□□□ 0.1
VCX3B-204ENST00000453306 TRIM31Q9BZY9 425 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 LRRC40Q9H9A6 602 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 IL21RQ9HBE5 538 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 GRHL1Q9NZI5 618 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 DMGDHQ9UI17 866 aaKnown RBP15.67■□□□□ 0.1
VCX3B-204ENST00000453306 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.67■□□□□ 0.1
VCX3B-204ENST00000453306 COQ6Q9Y2Z9 468 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 KCTD3Q9Y597 815 aa15.67■□□□□ 0.1
VCX3B-204ENST00000453306 SPEGQ15772 3267 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 TBC1D3DA0A087WVF3 549 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 TBC1D3IA0A087WXS9 549 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 TBC1D3EA0A087X179 549 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 TBC1D3KA0A087X1G2 549 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 A0A1W2PQ67 120 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 TBC1D3FA6NER0 549 aaPredicted RBP15.66■□□□□ 0.1
VCX3B-204ENST00000453306 TBC1D3LB9A6J9 549 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 DNALI1O14645 258 aaPredicted RBP15.66■□□□□ 0.1
VCX3B-204ENST00000453306 RAD51BO15315 384 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 AVILO75366 819 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 HEXIM1O94992 359 aaKnown RBP15.66■□□□□ 0.1
VCX3B-204ENST00000453306 CLDN7O95471 211 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 C1SP09871 688 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 TBC1D3HP0C7X1 549 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 VIPR1P32241 457 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 ACTN2P35609 894 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 GRIA4P48058 902 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 CSNK1EP49674 416 aaKnown RBP15.66■□□□□ 0.1
VCX3B-204ENST00000453306 LIG3P49916 1009 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 POLR2LP62875 67 aaKnown RBP15.66■□□□□ 0.1
VCX3B-204ENST00000453306 NUMA1Q14980 2115 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 INAVAQ3KP66 663 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 DNTTIP2Q5QJE6 756 aaKnown RBP15.66■□□□□ 0.1
VCX3B-204ENST00000453306 CERCAMQ5T4B2 595 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 CFAP58Q5T655 872 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 KIAA0895LQ68EN5 471 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 TBC1D3GQ6DHY5 549 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 TBC1D3CQ6IPX1 549 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 DBX2Q6ZNG2 339 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 LYSMD3Q7Z3D4 306 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 TBC1D3Q8IZP1 549 aaPredicted RBP15.66■□□□□ 0.1
VCX3B-204ENST00000453306 PELI3Q8N2H9 469 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 C1QTNF2Q9BXJ5 285 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 ADGRE3Q9BY15 652 aa15.66■□□□□ 0.1
VCX3B-204ENST00000453306 EIF2B3Q9NR50 452 aaKnown RBP15.66■□□□□ 0.1
VCX3B-204ENST00000453306 ASIC3Q9UHC3 531 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms