RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PCDHB7Q9Y5E2 793 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 PCDHB2Q9Y5E7 798 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 COPG1Q9Y678 874 aaKnown RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 CDY1Q9Y6F8 540 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 DDX49Q9Y6V7 483 aaKnown RBP4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 COMMD3-BMI1R4GMX3 469 aa4.47□□□□□ -1.69
HMGB3P21-201ENST00000452483 KIF7Q2M1P5 1343 aa4.46□□□□□ -1.69
HMGB3P21-201ENST00000452483 TBC1D3DA0A087WVF3 549 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TBC1D3IA0A087WXS9 549 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 A0A087WZY1 265 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TBC1D3EA0A087X179 549 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TBC1D3KA0A087X1G2 549 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TRBV2A0A0J9YWF9 115 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 FAM230AA0A1W2PPH8 454 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 PMS2P1A4D2B8 440 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TBC1D3BA6NDS4 549 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TBC1D3FA6NER0 549 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 PRR5-ARHGAP8B1AHC4 643 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TBC1D3LB9A6J9 549 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 F8VZ95 297 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 GOLGA8SH3BPF8 625 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 NRP1O14786 923 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 KIAA0391O15091 583 aaKnown RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 MED7O43513 233 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 SSX5O60225 188 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 CIDEAO60543 219 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 MITFO75030 526 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 USP12O75317 370 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 CRCPO75575 148 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 SEC31AO94979 1220 aaKnown RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 SMC2O95347 1197 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 KRT14P02533 472 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 KRT8P05787 483 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 LIPFP07098 398 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 SRPRAP08240 638 aaKnown RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TBC1D3HP0C7X1 549 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 STAG3L3P0CL85 134 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 IL2RBP14784 551 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 ATF2P15336 505 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 FAHP16930 419 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 NR1D1P20393 614 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 ACHEP22303 614 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 GPTP24298 496 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 MGAT1P26572 445 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 PTBP1P26599 531 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 CD27P26842 260 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 PRKAR1BP31321 381 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 THBS4P35443 961 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 WNT5AP41221 380 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 VIPR2P41587 438 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 ARHGAP25P42331 645 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 NR2C2P49116 596 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 GALCP54803 685 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 MTTPP55157 894 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 UCP2P55851 309 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TNFRSF17Q02223 184 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TAP1Q03518 808 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 MZT1Q08AG7 82 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 HNRNPDQ14103 355 aaKnown RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 GIT2Q14161 759 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 VEPH1Q14D04 833 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 MGAT5BQ3V5L5 792 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 NADK2Q4G0N4 442 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 KLHL26Q53HC5 615 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 XKR3Q5GH77 459 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZNF667Q5HYK9 610 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TBC1D3GQ6DHY5 549 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TBC1D3CQ6IPX1 549 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 PMF1Q6P1K2 205 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 CORO6Q6QEF8 472 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 LIPIQ6XZB0 460 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 GLDNQ6ZMI3 551 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 MACC1Q6ZN28 852 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 CLEC17AQ6ZS10 378 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 SEM1Q6ZVN7 128 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 C1orf186Q6ZWK4 172 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 KRT27Q7Z3Y8 459 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 CENPVQ7Z7K6 275 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 CUZD1Q86UP6 607 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 AACSQ86V21 672 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 SGMS1Q86VZ5 419 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 WDR49Q8IV35 697 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TBC1D3Q8IZP1 549 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 ENDOVQ8N8Q3 282 aaKnown RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 GBP7Q8N8V2 638 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 UXS1Q8NBZ7 420 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 LEMD2Q8NC56 503 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 PIK3C3Q8NEB9 887 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 REPS2Q8NFH8 660 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 DNERQ8NFT8 737 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TSPAN14Q8NG11 270 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 GLMPQ8WWB7 406 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 INPP5DQ92835 1189 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 DNASE1L2Q92874 299 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 MIB2Q96AX9 1013 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 DHTKD1Q96HY7 919 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 PIWIL1Q96J94 861 aaKnown RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 PHACTR3Q96KR7 559 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 NAP1L3Q99457 506 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 SH3GL1Q99961 368 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms