RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 NDST3O95803 873 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 ATXN1LP0C7T5 689 aaKnown RBP19.94■□□□□ 0.78
COL9A3-202ENST00000452372 WNT3AP56704 352 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 MTM1Q13496 603 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 GALNT3Q14435 633 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 INPP5AQ14642 412 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 CDKN3Q16667 212 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 CCDC70Q6NSX1 233 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 CCNI2Q6ZMN8 369 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-202ENST00000452372 KDM7AQ6ZMT4 941 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 TECPR1Q7Z6L1 1165 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 RAVER1Q8IY67 606 aaKnown RBP19.94■□□□□ 0.78
COL9A3-202ENST00000452372 ZCCHC14Q8WYQ9 949 aaKnown RBP19.94■□□□□ 0.78
COL9A3-202ENST00000452372 DTD2Q96FN9 168 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 MRGPRX2Q96LB1 330 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 TDRD6O60522 2096 aaKnown RBP19.93■□□□□ 0.78
COL9A3-202ENST00000452372 A0A0U1RQS6 177 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 GOLGA8CPA6NN73 597 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 ENC1O14682 589 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 ANXA9O76027 345 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 MSNP26038 577 aaKnown RBP19.93■□□□□ 0.78
COL9A3-202ENST00000452372 CXCR5P32302 372 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 ETV3P41162 512 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 STC1P52823 247 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 THOP1P52888 689 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 PDE1CQ14123 709 aaPredicted RBP19.93■□□□□ 0.78
COL9A3-202ENST00000452372 PTK2BQ14289 1009 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 FZD2Q14332 565 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 TPRG1LQ5T0D9 272 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 ESRP1Q6NXG1 681 aaKnown RBP19.93■□□□□ 0.78
COL9A3-202ENST00000452372 Q6ZVL8 140 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 SLC35F6Q8N357 371 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 FAM71DQ8N9W8 422 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 PLA2G15Q8NCC3 412 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 CCDC110Q8TBZ0 833 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 RHBDD1Q8TEB9 315 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 MAIP1Q8WWC4 291 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 ATG4AQ8WYN0 398 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 NUS1Q96E22 293 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 TMEM121Q9BTD3 319 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 APOOQ9BUR5 198 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 PYCARDQ9ULZ3 195 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 APOBEC2Q9Y235 224 aaKnown RBP19.93■□□□□ 0.78
COL9A3-202ENST00000452372 NBEAQ8NFP9 2946 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 CACNA1GO43497 2377 aa19.93■□□□□ 0.78
COL9A3-202ENST00000452372 USP27XA6NNY8 438 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 F5H423 210 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-202ENST00000452372 FLRT2O43155 660 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 LIASO43766 372 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 CEP104O60308 925 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 GCATO75600 419 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 CLDN7O95471 211 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 FGGP02679 453 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 PCCBP05166 539 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 C1SP09871 688 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 STIP1P31948 543 aaKnown RBP19.92■□□□□ 0.78
COL9A3-202ENST00000452372 TRIM23P36406 574 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 GEMP55040 296 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 IL9RQ01113 521 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 SIX1Q15475 284 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-202ENST00000452372 OASLQ15646 514 aaKnown RBP19.92■□□□□ 0.78
COL9A3-202ENST00000452372 NLRP8Q86W28 1048 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 SAP25Q8TEE9 199 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 C1orf54Q8WWF1 131 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 SRPK1Q96SB4 655 aaKnown RBP19.92■□□□□ 0.78
COL9A3-202ENST00000452372 GORASP1Q9BQQ3 440 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 MAGEE1Q9HCI5 957 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 ZKSCAN5Q9Y2L8 839 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 AAR2Q9Y312 384 aaKnown RBP19.92■□□□□ 0.78
COL9A3-202ENST00000452372 CELSR3Q9NYQ7 3312 aa19.92■□□□□ 0.78
COL9A3-202ENST00000452372 C1orf232A0A0U1RR37 186 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 HOXC4P09017 264 aaPredicted RBP19.91■□□□□ 0.78
COL9A3-202ENST00000452372 PSMB4P28070 264 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 EPHA8P29322 1005 aaPredicted RBP19.91■□□□□ 0.78
COL9A3-202ENST00000452372 TNNT3P45378 269 aaPredicted RBP19.91■□□□□ 0.78
COL9A3-202ENST00000452372 GDF10P55107 478 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 DPTQ07507 201 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 BNIP3Q12983 259 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 PRPSAP1Q14558 356 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 CCNG2Q16589 344 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 PNCKQ6P2M8 343 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 PARGQ86W56 976 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 NRSN1Q8IZ57 195 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 IPMKQ8NFU5 416 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 CCHCR1Q8TD31 782 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 RTP4Q96DX8 246 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 PBKQ96KB5 322 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 PPP1R2P1Q96PQ5 205 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 CDC6Q99741 560 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 ITPR1Q14643 2758 aa19.91■□□□□ 0.78
COL9A3-202ENST00000452372 CSF2P04141 144 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 ITGAVP06756 1048 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 HLA-DPA1P20036 260 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 SLC1A5Q15758 541 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 PARP6Q2NL67 630 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 SIRPB2Q5JXA9 342 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 DRICH1Q6PGQ1 229 aaPredicted RBP19.9■□□□□ 0.78
COL9A3-202ENST00000452372 MACC1Q6ZN28 852 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 ARHGEF18Q6ZSZ5 1173 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 RFLNAQ6ZTI6 216 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms