RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CXXC5Q7LFL8 322 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 ZNF571Q7Z3V5 609 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 PIWIL4Q7Z3Z4 852 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 ANKS1BQ7Z6G8 1248 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ZBTB8OSQ8IWT0 167 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ZZZ3Q8IYH5 903 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MEIOBQ8N635 442 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 BANPQ8N9N5 519 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NPLOC4Q8TAT6 608 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NSUN6Q8TEA1 469 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 TBCKQ8TEA7 893 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SLC44A1Q8WWI5 657 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ASB13Q8WXK3 278 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CLP1Q92989 425 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 SLC45A3Q96JT2 553 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MAELQ96JY0 434 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 PHB2Q99623 299 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 HEMGNQ9BXL5 484 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NMUR2Q9GZQ4 415 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FAM49AQ9H0Q0 323 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 THAP2Q9H0W7 228 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 OR51E2Q9H255 320 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RIBC2Q9H4K1 309 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DNAJC18Q9H819 358 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 REEP1Q9H902 201 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 C3orf14Q9HBI5 128 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TMEM8AQ9HCN3 771 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 POLD4Q9HCU8 107 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 IFT46Q9NQC8 304 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TMEM45AQ9NWC5 275 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 EIF3KQ9UBQ5 218 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 VPS51Q9UID3 782 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 IKZF3Q9UKT9 509 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PPM1HQ9ULR3 514 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 KCNIP3Q9Y2W7 256 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MED16Q9Y2X0 877 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PCDHGB2Q9Y5G2 931 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TCHHQ07283 1943 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 A0A087X0B3 334 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NPHP3-ACAD11A0A0J9YXS1 232 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 VILLO15195 856 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TBX1O43435 398 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TGOLN2O43493 480 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC28A2O43868 658 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PRKYO43930 277 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NPHS1O60500 1241 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CDC40O60508 579 aaKnown RBP eCLIP2.2□□□□□ -2.06
USP53-202ENST00000450251 KHDRBS3O75525 346 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 RPS6KA4O75676 772 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SCELO95171 688 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IFNA10P01566 189 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PLEKP08567 350 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 C6orf222P0C671 652 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNF14P17017 642 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 JUNBP17275 347 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ZP3P21754 424 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PAX6P26367 422 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PTPN7P35236 360 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RPS19P39019 145 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 GRIA3P42263 894 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CTSKP43235 329 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ALDH3B2P48448 385 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NR2C2P49116 596 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ALDH3A2P51648 485 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 JAK3P52333 1124 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ACTR2P61160 394 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TSPAN5P62079 268 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RNF4P78317 190 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNF33BQ06732 778 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RPA4Q13156 261 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RAPSNQ13702 412 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DAG1Q14118 895 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GK2Q14410 553 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 KCTD2Q14681 263 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DUSP7Q16829 419 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KLHL26Q53HC5 615 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LBHQ53QV2 105 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ATAD3CQ5T2N8 411 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 BTBD8Q5XKL5 378 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MSANTD1Q6ZTZ1 278 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SSX9Q7RTT3 188 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NLRX1Q86UT6 975 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FAM35AQ86V20 835 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IFNEQ86WN2 208 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LURAP1LQ8IV03 231 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC30A8Q8IWU4 369 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NIM1KQ8IY84 436 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SEPT12Q8IYM1 358 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LNX2Q8N448 690 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC15A4Q8N697 577 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LRRC57Q8N9N7 239 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DENND6BQ8NEG7 585 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FAM46DQ8NEK8 389 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 BPIFB6Q8NFQ5 453 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 UFD1Q92890 307 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC41A3Q96GZ6 507 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CIB1Q99828 191 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SH2D3AQ9BRG2 576 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RIOK2Q9BVS4 552 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 TTYH3Q9C0H2 523 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms