RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CLASP2O75122 1294 aaKnown RBP12.4□□□□□ -0.42
UBE3B-204ENST00000449510 SEC22BO75396 215 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 PGLSO95336 258 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 POMCP01189 267 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 CD4P01730 458 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 VBP1P61758 197 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 HNRNPDQ14103 355 aaKnown RBP12.4□□□□□ -0.42
UBE3B-204ENST00000449510 GALNT3Q14435 633 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 SLC26A9Q7LBE3 791 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 ANKRD13AQ8IZ07 590 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 RDH11Q8TC12 318 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 PNPT1Q8TCS8 783 aaKnown RBP12.4□□□□□ -0.42
UBE3B-204ENST00000449510 GPR152Q8TDT2 470 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 ITCHQ96J02 903 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 TRHDEQ9UKU6 1024 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 MYH9P35579 1960 aaKnown RBP12.4□□□□□ -0.42
UBE3B-204ENST00000449510 PKD1L3Q7Z443 1732 aa12.4□□□□□ -0.42
UBE3B-204ENST00000449510 A0A1W2PQ67 120 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 SDHDO14521 159 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 CCNKO75909 580 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 ZNF12P17014 697 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 AKT1P31749 480 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 DGKEP52429 567 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 NAB1Q13506 487 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 TTC23Q5W5X9 447 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 THAP5Q7Z6K1 395 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 OR6J1Q8NGC5 347 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 FAR1Q8WVX9 515 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 LRCH3Q96II8 777 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 CATSPERBQ9H7T0 1116 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 ADGRE2Q9UHX3 823 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 PRG3Q9Y2Y8 225 aaPredicted RBP12.4□□□□□ -0.43
UBE3B-204ENST00000449510 RNF11Q9Y3C5 154 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 PMF1-BGLAPU3KQ54 211 aa12.4□□□□□ -0.43
UBE3B-204ENST00000449510 FER1L4A9Z1Z3 1794 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 PPP6CO00743 305 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 TNPO2O14787 897 aaKnown RBP12.39□□□□□ -0.43
UBE3B-204ENST00000449510 IDH3BO43837 385 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 GSTT2P0CG29 244 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 GSTT2BP0CG30 244 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 THRBP10828 461 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 ZNF132P52740 706 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 RAD51Q06609 339 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 ZNF846Q147U1 533 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 SV2CQ496J9 727 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 HECTD2Q5U5R9 776 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 AHSA2Q719I0 299 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 SLC22A16Q86VW1 577 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 CLIP4Q8N3C7 705 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 OR10A6Q8NH74 314 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 RHOBTB2Q9BYZ6 727 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 DPY30Q9C005 99 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 FAIMQ9NVQ4 179 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 ZDHHC7Q9NXF8 308 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 RIMS3Q9UJD0 308 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 SLC27A5Q9Y2P5 690 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 MAFBQ9Y5Q3 323 aaPredicted RBP12.39□□□□□ -0.43
UBE3B-204ENST00000449510 MYO10Q9HD67 2058 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 SMCHD1A6NHR9 2005 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 TCAF2A6NFQ2 919 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 C19orf81C9J6K1 198 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 GRID2O43424 1007 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 SLC2A3P11169 496 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 NPR3P17342 541 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 ADCYAP1R1P41586 468 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 SERPINH1P50454 418 aaKnown RBP12.39□□□□□ -0.43
UBE3B-204ENST00000449510 C1QTNF8P60827 252 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 DPYSL2Q16555 572 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 R3HCC1LQ7Z5L2 792 aaKnown RBP12.39□□□□□ -0.43
UBE3B-204ENST00000449510 CPSF7Q8N684 471 aaKnown RBP12.39□□□□□ -0.43
UBE3B-204ENST00000449510 TERB1Q8NA31 727 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 FAM110BQ8TC76 370 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 SPPL2AQ8TCT8 520 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 OMA1Q96E52 524 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 NODALQ96S42 347 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 MRGBPQ9NV56 204 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 CNTN6Q9UQ52 1028 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 NUMA1Q14980 2115 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 TIAM2Q8IVF5 1701 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 A8MT66 165 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 G3V2L1 256 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 PSMD3O43242 534 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 SLC22A3O75751 556 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 PORP16435 677 aaPredicted RBP12.39□□□□□ -0.43
UBE3B-204ENST00000449510 RPL38P63173 70 aaKnown RBP12.39□□□□□ -0.43
UBE3B-204ENST00000449510 ARHGEF7Q14155 803 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 TAB1Q15750 504 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 CCNYL2Q5T2Q4 361 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 B3GNT9Q6UX72 402 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 CHST13Q8NET6 341 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 MTERF3Q96E29 417 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 NSUN5Q96P11 429 aaKnown RBP12.39□□□□□ -0.43
UBE3B-204ENST00000449510 EHD3Q9NZN3 535 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 KLQ9UEF7 1012 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 VPS4AQ9UN37 437 aa12.39□□□□□ -0.43
UBE3B-204ENST00000449510 A6NL46 340 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 NCAM2O15394 837 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 DPP6P42658 865 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 GSK3BP49841 420 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 PRKG2Q13237 762 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms