RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 BATFQ16520 125 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 ZIK1Q3SY52 487 aaPredicted RBP8.94□□□□□ -0.98
NIPBL-202ENST00000448238 RETSATQ6NUM9 610 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 SERPINA13PQ6UXR4 307 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 GTF2H5Q6ZYL4 71 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 KCNMB4Q86W47 210 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 OR14A2Q96R54 314 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 KCTD15Q96SI1 283 aaPredicted RBP8.94□□□□□ -0.98
NIPBL-202ENST00000448238 SOHLH2Q9NX45 425 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 PPP4R1LQ9P1A2 415 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 M0QYT0 321 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 HOXA2O43364 376 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 FGBP02675 491 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 SLC2A5P22732 501 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 FMO4P31512 558 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 LIPEQ05469 1076 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 ORC1Q13415 861 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 SPIN3Q5JUX0 258 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 GPAT2Q6NUI2 795 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 C19orf35Q6ZS72 473 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 METTL25Q8N6Q8 603 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 IP6K1Q92551 441 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 UFD1Q92890 307 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 COQ8BQ96D53 544 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 TMEM106CQ9BVX2 250 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 C12orf65Q9H3J6 166 aaKnown RBP8.94□□□□□ -0.98
NIPBL-202ENST00000448238 KCNH7Q9NS40 1196 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 DNPEPQ9ULA0 475 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 ZBTB22O15209 634 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 MAGEC1O60732 1142 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 BAG6P46379 1132 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 ZER1Q7Z7L7 766 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 PAQR7Q86WK9 346 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 NLGN1Q8N2Q7 840 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 CPT1CQ8TCG5 803 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 ARL8BQ9NVJ2 186 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 LYARQ9NX58 379 aaKnown RBP8.94□□□□□ -0.98
NIPBL-202ENST00000448238 SLC27A6Q9Y2P4 619 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 NPATQ14207 1427 aa8.94□□□□□ -0.98
NIPBL-202ENST00000448238 RPTORQ8N122 1335 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 LCHNA4D1U4 455 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ERVV-2B6SEH9 535 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 TNFRSF10BO14763 440 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 CAMTA2O94983 1202 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ATE1O95260 518 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 FCER2P06734 321 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 PGAM1P18669 254 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 BGNP21810 368 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ADAM15Q13444 863 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 BOP1Q14137 746 aaKnown RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 MARC1Q5VT66 337 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF529Q6P280 563 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 OR2W6PQ8NHA6 318 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 FBXO32Q969P5 355 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 EIF5A2Q9GZV4 153 aaKnown RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 TMEM27Q9HBJ8 222 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF69Q9UC07 566 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 KCNS2Q9ULS6 477 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 TIAM1Q13009 1591 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 USP17L3A6NCW0 530 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 USP17L4A6NCW7 530 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 OTOL1A6NHN0 477 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF705EA8MWA4 302 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 E7ENX8 843 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF823P16415 610 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 UGT2B10P36537 528 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 BCAT1P54687 386 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 SLC3A1Q07837 685 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 GOLGA7BQ2TAP0 167 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 USP17L1Q7RTZ2 530 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 SMIM15Q7Z3B0 74 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 LZTR1Q8N653 840 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 C5orf34Q96MH7 638 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 EBNA1BP2Q99848 306 aaKnown RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 GPATCH1Q9BRR8 931 aaKnown RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 SEC14L4Q9UDX3 406 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 SEC14L3Q9UDX4 400 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 MAGED1Q9Y5V3 778 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 OIP5O43482 229 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 USP12O75317 370 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 HRGP04196 525 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 CSF1RP07333 972 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 RAB7AP51149 207 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 RAB30Q15771 203 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 NINJ1Q92982 152 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 TAMM41Q96BW9 452 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 FBXO44Q9H4M3 255 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ABCB9Q9NP78 766 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 TLR8Q9NR97 1041 aaKnown RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 UXTQ9UBK9 157 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ZMYM5Q9UJ78 669 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 LARGE1O95461 756 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 RHOCP08134 193 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 RPL14P50914 215 aaKnown RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 CYP4F8P98187 520 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 XKR3Q5GH77 459 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 SLC47A1Q96FL8 570 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 BRD9Q9H8M2 597 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 C17orf75Q9HAS0 396 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 PCDHGC3Q9UN70 934 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms