RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 IL17RDQ8NFM7 739 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 SDCCAG3Q96C92 435 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 CDCA5Q96FF9 252 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 MARK4Q96L34 752 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 CENPOQ9BU64 300 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 APOBEC3GQ9HC16 384 aaKnown RBP19.2■□□□□ 0.66
HMGA1-205ENST00000447654 GIMAP4Q9NUV9 329 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 CCDC78A2IDD5 438 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 ZBTB42B2RXF5 422 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 NRP2O60462 931 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 TRAPPC2P0DI81 140 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 TRAPPC2BP0DI82 140 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 IL32P24001 234 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 ELK4P28324 431 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 CRY1Q16526 586 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 SYCE2Q6PIF2 218 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 R3HCC1LQ7Z5L2 792 aaKnown RBP19.2■□□□□ 0.66
HMGA1-205ENST00000447654 CDKL3Q8IVW4 592 aaPredicted RBP19.2■□□□□ 0.66
HMGA1-205ENST00000447654 GALNT12Q8IXK2 581 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 BEND7Q8N7W2 519 aaPredicted RBP19.2■□□□□ 0.66
HMGA1-205ENST00000447654 PSMA8Q8TAA3 256 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 URGCPQ8TCY9 931 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 AGR3Q8TD06 166 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 GIMAP1Q8WWP7 306 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 ASB2Q96Q27 587 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 MORF4L1Q9UBU8 362 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 ZDHHC2Q9UIJ5 367 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 KIAA1257Q9ULG3 409 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 MTF2Q9Y483 593 aaPredicted RBP19.2■□□□□ 0.66
HMGA1-205ENST00000447654 ADGRA2Q96PE1 1338 aa19.2■□□□□ 0.66
HMGA1-205ENST00000447654 MAGEB16A2A368 324 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 ZNF99A8MXY4 864 aaPredicted RBP19.19■□□□□ 0.66
HMGA1-205ENST00000447654 TOR1BO14657 336 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 NRP1O14786 923 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 SNAP29O95721 258 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 TNNI1P19237 187 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 ENPP1P22413 925 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 GRIA4P48058 902 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 EPS8Q12929 822 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 TARDBPQ13148 414 aaKnown RBP eCLIP19.19■□□□□ 0.66
HMGA1-205ENST00000447654 FASTKQ14296 549 aaKnown RBP19.19■□□□□ 0.66
HMGA1-205ENST00000447654 TJAP1Q5JTD0 557 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 DESI1Q6ICB0 168 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 PMF1Q6P1K2 205 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 METTL7BQ6UX53 244 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 NPNTQ6UXI9 565 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 HORMAD1Q86X24 394 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 CCDC103Q8IW40 242 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 KIAA1958Q8N8K9 716 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 OR5B17Q8NGF7 314 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 COPS5Q92905 334 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 ELMO2Q96JJ3 720 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 MUS81Q96NY9 551 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 GON7Q9BXV9 100 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.19■□□□□ 0.66
HMGA1-205ENST00000447654 FBXO5Q9UKT4 447 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 ANKRD6Q9Y2G4 727 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 A3GALT2U3KPV4 340 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 PMF1-BGLAPU3KQ54 211 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 SDHDO14521 159 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 PIGRP01833 764 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 CHRNA1P02708 482 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 HADHAP40939 763 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 ATP4BP51164 291 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 SLC7A2P52569 658 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 TAF5Q15542 800 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 TYSND1Q2T9J0 566 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 TTC23Q5W5X9 447 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 MAGEE2Q8TD90 523 aaPredicted RBP19.19■□□□□ 0.66
HMGA1-205ENST00000447654 ZNF668Q96K58 619 aaPredicted RBP19.19■□□□□ 0.66
HMGA1-205ENST00000447654 RNF157Q96PX1 679 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 BTBD2Q9BX70 525 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 ZNF358Q9NW07 568 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 ANAPC2Q9UJX6 822 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 GRIP1Q9Y3R0 1128 aa19.19■□□□□ 0.66
HMGA1-205ENST00000447654 PDZK1P1A8MUH7 402 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 LDLRP01130 860 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 GJB1P08034 283 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 KRT19P08727 400 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 LRPAP1P30533 357 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 TNFSF9P41273 254 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 LIMK2P53671 638 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 DEFA1P59665 94 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 DEFA3P59666 94 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 FRG1Q14331 258 aaKnown RBP19.18■□□□□ 0.66
HMGA1-205ENST00000447654 SNAP47Q5SQN1 464 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 C9orf131Q5VYM1 1079 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 FBXO16Q8IX29 292 aaPredicted RBP19.18■□□□□ 0.66
HMGA1-205ENST00000447654 C8orf59Q8N0T1 100 aaPredicted RBP19.18■□□□□ 0.66
HMGA1-205ENST00000447654 LRRC71Q8N4P6 559 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 DCLK2Q8N568 766 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 GABPB2Q8TAK5 448 aaPredicted RBP19.18■□□□□ 0.66
HMGA1-205ENST00000447654 PROX1Q92786 737 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.18■□□□□ 0.664e-6■■■■■ 48.1
HMGA1-205ENST00000447654 RBBP8Q99708 897 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 MSTO1Q9BUK6 570 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 MMP27Q9H306 513 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 ABCB10Q9NRK6 738 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 ZMAT5Q9UDW3 170 aaKnown RBP19.18■□□□□ 0.66
HMGA1-205ENST00000447654 USP18Q9UMW8 372 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms