RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 URADA6NGE7 173 aa13.33□□□□□ -0.27
PRDM15-206ENST00000447016 LRRC14BA6NHZ5 514 aa13.33□□□□□ -0.27
PRDM15-206ENST00000447016 MAFO75444 373 aaPredicted RBP13.33□□□□□ -0.27
PRDM15-206ENST00000447016 FADS2O95864 444 aaKnown RBP13.33□□□□□ -0.27
PRDM15-206ENST00000447016 WNT3AP56704 352 aa13.33□□□□□ -0.27
PRDM15-206ENST00000447016 HDAC10Q969S8 669 aa13.33□□□□□ -0.27
PRDM15-206ENST00000447016 ACO2Q99798 780 aaKnown RBP13.33□□□□□ -0.27
PRDM15-206ENST00000447016 THG1LQ9NWX6 298 aaKnown RBP13.33□□□□□ -0.27
PRDM15-206ENST00000447016 CHURC1-FNTBB4DL54 471 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 KPNA3O00505 521 aaPredicted RBP13.33□□□□□ -0.28
PRDM15-206ENST00000447016 ACADMP11310 421 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 POLR2JP52435 117 aaKnown RBP13.33□□□□□ -0.28
PRDM15-206ENST00000447016 HEXDCQ8WVB3 486 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 LINGO1Q96FE5 620 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 NODALQ96S42 347 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.33□□□□□ -0.28
PRDM15-206ENST00000447016 USP20Q9Y2K6 914 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 POLR3HQ9Y535 204 aaPredicted RBP13.33□□□□□ -0.28
PRDM15-206ENST00000447016 MEIS2O14770 477 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 CSH1P0DML2 217 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 CSH2P0DML3 217 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 DPEP1P16444 411 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 TSPAN8P19075 237 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 RPL4P36578 427 aaKnown RBP13.33□□□□□ -0.28
PRDM15-206ENST00000447016 MRPS5P82675 430 aaKnown RBP13.33□□□□□ -0.28
PRDM15-206ENST00000447016 SMCO1Q147U7 214 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 IL17AQ16552 155 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 CPSF6Q16630 551 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRDM15-206ENST00000447016 WSCD1Q658N2 575 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 SCIMPQ6UWF3 145 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 PJA1Q8NG27 643 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 TMCO6Q96DC7 493 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 CDT1Q9H211 546 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 SNX7Q9UNH6 387 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 GIT1Q9Y2X7 761 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 POLR2EP19388 210 aaKnown RBP13.33□□□□□ -0.28
PRDM15-206ENST00000447016 MAPK9P45984 424 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 ALG11Q2TAA5 492 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 C6orf52Q5T4I8 152 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 PIK3R6Q5UE93 754 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 ZYG11AQ6WRX3 759 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 ZBTB46Q86UZ6 589 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 SPPL2CQ8IUH8 684 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 TRAPPC12Q8WVT3 735 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 PPCDCQ96CD2 204 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 B3GALT6Q96L58 329 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 DSN1Q9H410 356 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 GLOD4Q9HC38 313 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 MCUBQ9NWR8 336 aa13.33□□□□□ -0.28
PRDM15-206ENST00000447016 ELOVL7A1L3X0 281 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 FAM86C2PA6NEL3 165 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 ZBTB11O95625 1053 aaPredicted RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 LDOC1O95751 146 aaPredicted RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 ASMTP46597 345 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 CDH13P55290 713 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 ACTR3P61158 418 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 TRIM32Q13049 653 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 AKIRIN2Q53H80 203 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 FCGR1BQ92637 280 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 CLP1Q92989 425 aaKnown RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 DNMT3LQ9UJW3 386 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 C5orf60A6NFR6 353 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 PSIP1O75475 530 aaKnown RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 PTX3P26022 381 aaPredicted RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 TIE1P35590 1138 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 INTS6LQ5JSJ4 861 aaKnown RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 HECTD3Q5T447 861 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 RAP1GAP2Q684P5 730 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 IQSEC1Q6DN90 963 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 FBXL19Q6PCT2 694 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 TRPV3Q8NET8 790 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 CADM1Q9BY67 442 aaKnown RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 LMAN2LQ9H0V9 348 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 PCDHB1Q9Y5F3 818 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 SPATA31A5Q5VU36 1347 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 SPATA31A7Q8IWB4 1347 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 ZW10O43264 779 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 CYP4B1P13584 511 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 KIR3DL1P43629 444 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 PSEN2P49810 448 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 RAB2AP61019 212 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 SLC25A52Q3SY17 297 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 KHDC1Q4VXA5 237 aaKnown RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 RNASEH2BQ5TBB1 312 aaKnown RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 LCN1P1Q5VSP4 162 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 PRR23BQ6ZRT6 265 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 RASAL3Q86YV0 1011 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 CBR4Q8N4T8 237 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 CPT1BQ92523 772 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 DIRAS2Q96HU8 199 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 PGLYRP2Q96PD5 576 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 MNTQ99583 582 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 FAM124BQ9H5Z6 455 aaPredicted RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 OR5F1O95221 314 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 LIMK2P53671 638 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 AP3S2P59780 193 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 EN1Q05925 392 aaPredicted RBP13.32□□□□□ -0.28
PRDM15-206ENST00000447016 TEX44Q53QW1 395 aa13.32□□□□□ -0.28
PRDM15-206ENST00000447016 RUNDC3AQ59EK9 446 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms