RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 HERC3Q15034 1050 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 LIN9Q5TKA1 542 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 TTC33Q6PID6 262 aaPredicted RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 PAQR9Q6ZVX9 377 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 AKAP14Q86UN6 197 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 SLC51BQ86UW2 128 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 LACC1Q8IV20 430 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 ANKFN1Q8N957 763 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 KYQ8NBH2 561 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 B3GALNT2Q8NCR0 500 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 SH3YL1Q96HL8 342 aaPredicted RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 FEM1CQ96JP0 617 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 SNX25Q9H3E2 840 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 COQ10BQ9H8M1 238 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 CD320Q9NPF0 282 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 HCFC1R1Q9NWW0 138 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 ABI2Q9NYB9 513 aaPredicted RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 DNPEPQ9ULA0 475 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 TRDMT1O14717 391 aaKnown RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 ACOT8O14734 319 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 FOXD2O60548 495 aaPredicted RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 HNRNPA1P09651 372 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX56-206ENST00000446987 HAPLN1P10915 354 aaPredicted RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 KRT3P12035 628 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 PTPN1P18031 435 aaKnown RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 CD58P19256 250 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 MAP4P27816 1152 aaKnown RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 RFC1P35251 1148 aaPredicted RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 MFAP3P55082 362 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 TPTEP56180 551 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 NTHL1P78549 312 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 TWF1Q12792 350 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 KLF10Q13118 480 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 PMS2P3Q13401 168 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 CBX2Q14781 532 aaPredicted RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 LRRC38Q5VT99 294 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 GPR107Q5VW38 600 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 PPP1R2P3Q6NXS1 205 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 PLEKHG7Q6ZR37 379 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 CDHR3Q6ZTQ4 885 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 DCP1BQ8IZD4 617 aaKnown RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 TMCO5AQ8N6Q1 288 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 LSMEM1Q8N8F7 131 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 OR13F1Q8NGS4 319 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 RP9Q8TA86 221 aaKnown RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 SPPL2BQ8TCT7 592 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 FNIP1Q8TF40 1166 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 SMG7Q92540 1137 aaKnown RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 HEMGNQ9BXL5 484 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 LRRC3Q9BY71 257 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 B3GNT5Q9BYG0 378 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 SHCBP1LQ9BZQ2 653 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 CISHQ9NSE2 258 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 SACM1LQ9NTJ5 587 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 MAFFQ9ULX9 164 aa13.1□□□□□ -0.31
DDX56-206ENST00000446987 TMA7Q9Y2S6 64 aaKnown RBP13.1□□□□□ -0.31
DDX56-206ENST00000446987 C1orf232A0A0U1RR37 186 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 FADS2P1A8MWK0 482 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 EVPLLA8MZ36 301 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 CLDN5O00501 218 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 PRRG1O14668 218 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 RNASEH2AO75792 299 aaKnown RBP13.09□□□□□ -0.31
DDX56-206ENST00000446987 KITP10721 976 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 CYP11B1P15538 503 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 CYP2F1P24903 491 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 GPD2P43304 727 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 NME5P56597 212 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 TRAF2Q12933 501 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 CCNJQ5T5M9 372 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 TIFABQ6ZNK6 161 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 CCDC149Q6ZUS6 474 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 RTL10Q7L3V2 364 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 C14orf80Q86SX3 495 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 ACOT1Q86TX2 421 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 UNC93AQ86WB7 457 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 TMC8Q8IU68 726 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 MCOLN2Q8IZK6 566 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 CRYBG2Q8N1P7 616 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 GLIS1Q8NBF1 620 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 SLC4A11Q8NBS3 891 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 BHLHE22Q8NFJ8 381 aaPredicted RBP13.09□□□□□ -0.31
DDX56-206ENST00000446987 GRIN3AQ8TCU5 1115 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 C2orf15Q8WU43 125 aaKnown RBP13.09□□□□□ -0.31
DDX56-206ENST00000446987 GIMAP1Q8WWP7 306 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 NT5C1BQ96P26 610 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 SNX18Q96RF0 628 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 WDR83Q9BRX9 315 aaKnown RBP13.09□□□□□ -0.31
DDX56-206ENST00000446987 ZNF518BQ9C0D4 1074 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 C20orf27Q9GZN8 174 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 TP63Q9H3D4 680 aaPredicted RBP13.09□□□□□ -0.31
DDX56-206ENST00000446987 AKIP1Q9NQ31 210 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 ANLNQ9NQW6 1124 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 DNMT3BQ9UBC3 853 aaKnown RBP13.09□□□□□ -0.31
DDX56-206ENST00000446987 PCDHB5Q9Y5E4 795 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 ANAPC1Q9H1A4 1944 aa13.09□□□□□ -0.31
DDX56-206ENST00000446987 RGSL1A5PLK6 1076 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 TRIM49D1C9J1S8 452 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 ZNF195O14628 629 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 RALBP11234 206 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms