RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ZNF542PQ5EBM4 170 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 RAET1GQ6H3X3 334 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 ZNF765Q7L2R6 523 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 NRSN1Q8IZ57 195 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 SLC35F6Q8N357 371 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 SLC25A41Q8N5S1 370 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 AP2M1Q96CW1 435 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 CAMK1GQ96NX5 476 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 GPR63Q9BZJ6 419 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 ZFYVE1Q9HBF4 777 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 PKD2L2Q9NZM6 624 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 CD84Q9UIB8 345 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 PCOLCE2Q9UKZ9 415 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 ZKSCAN5Q9Y2L8 839 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 SPTBN2O15020 2390 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 RGSL1A5PLK6 1076 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 K7ESM1 405 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 PDE2AO00408 941 aaPredicted RBP17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 GCATO75600 419 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 SLC4A1P02730 911 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 FGF1P05230 155 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 PYGLP06737 847 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 PIRTP0C851 137 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 ACTN2P35609 894 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 TRIM23P36406 574 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 KIAA1024LP59773 190 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 DPTQ07507 201 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 EIF2B5Q13144 721 aaKnown RBP17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 SNX1Q13596 522 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 CDKN3Q16667 212 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 P3H1Q32P28 736 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 SIRPB2Q5JXA9 342 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 ERMP1Q7Z2K6 904 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 LYSMD3Q7Z3D4 306 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 BTN2A2Q8WVV5 523 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 FUBP1Q96AE4 644 aaKnown RBP17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 PBKQ96KB5 322 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 WDR92Q96MX6 357 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 CDC6Q99741 560 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 FICDQ9BVA6 458 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 SLC13A1Q9BZW2 595 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 ABCG8Q9H221 673 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 PHPT1Q9NRX4 125 aaPredicted RBP17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 PYCARDQ9ULZ3 195 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 SHOC2Q9UQ13 582 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 BTBD3Q9Y2F9 522 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 ZNF711Q9Y462 761 aa17.42■□□□□ 0.38
SMARCAL1-209ENST00000444508 GIPC1O14908 333 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 PIAS2O75928 621 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 HOXC4P09017 264 aaPredicted RBP17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 ATXN1LP0C7T5 689 aaKnown RBP17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 JUNDP17535 347 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 DGKAP23743 735 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 TEAD1P28347 426 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 GPR1P46091 355 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 SPINT3P49223 89 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 BLKP51451 505 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 GDF10P55107 478 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 PPARDQ03181 441 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 OASLQ15646 514 aaKnown RBP17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 TRIP6Q15654 476 aaKnown RBP17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 SLC1A5Q15758 541 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 CCNG2Q16589 344 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 PARP6Q2NL67 630 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 HS1BP3Q53T59 392 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 FAXCQ5TGI0 409 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 ENPP7Q6UWV6 458 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 RFLNAQ6ZTI6 216 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 PELI3Q8N2H9 469 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 SCAMP4Q969E2 229 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 RTP4Q96DX8 246 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 GORASP1Q9BQQ3 440 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 FAM83DQ9H4H8 585 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 RAD18Q9NS91 495 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 HOMER3Q9NSC5 361 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 HACD3Q9P035 362 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 KLQ9UEF7 1012 aa17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 APOBEC3BQ9UH17 382 aaKnown RBP17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 TDRD6O60522 2096 aaKnown RBP17.41■□□□□ 0.38
SMARCAL1-209ENST00000444508 NEMP2A6NFY4 417 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 USP27XA6NNY8 438 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 CBFA2T3O75081 653 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 RASGRP1O95267 797 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 AGTP01019 485 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 IFNB1P01574 187 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 ATP1A1P05023 1023 aaKnown RBP17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 MYCLP1P12525 358 aaPredicted RBP17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 CHRNA4P43681 627 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 SIM1P81133 766 aaPredicted RBP17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 SIX1Q15475 284 aaPredicted RBP17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 NLRP8Q86W28 1048 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 HEATR4Q86WZ0 1026 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 HID1Q8IV36 788 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 PHACTR4Q8IZ21 702 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 EID2Q8N6I1 236 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 CCDC89Q8N998 374 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 OR56A4Q8NGH8 313 aa17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 NAP1L3Q99457 506 aaPredicted RBP17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 RIOK2Q9BVS4 552 aaKnown RBP17.4■□□□□ 0.38
SMARCAL1-209ENST00000444508 TEX101Q9BY14 249 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms