RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ACADMP11310 421 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 POLR2EP19388 210 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TACR2P21452 398 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 OR1E1P30953 314 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 GP5P40197 560 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 CSKP41240 450 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TUBP50607 506 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 CCR3P51677 355 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 IRX4P78413 519 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 LMAN2Q12907 356 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 MMRN1Q13201 1228 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 FUT11Q495W5 492 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TAF1BQ53T94 588 aaPredicted RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 MS4A13Q5J8X5 152 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 MBLAC2Q68D91 279 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 PRUNE1Q86TP1 453 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 ZC3H18Q86VM9 953 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TMEM126BQ8IUX1 230 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 IGDCC3Q8IVU1 814 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SPEM1Q8N4L4 309 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 FAM13CQ8NE31 585 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 OR6Y1Q8NGX8 325 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 CCDC110Q8TBZ0 833 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 USP33Q8TEY7 942 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SCG3Q8WXD2 468 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 JADE3Q92613 823 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TMEM120AQ9BXJ8 343 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 OSBPL2Q9H1P3 480 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 CASS4Q9NQ75 786 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 ELOVL2Q9NXB9 296 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 IL37Q9NZH6 218 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TAGLN3Q9UI15 199 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 HAO1Q9UJM8 370 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 GMEB2Q9UKD1 530 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 HCN2Q9UL51 889 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 HS3ST4Q9Y661 456 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 CKAP5Q14008 2032 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 OBSL1O75147 1896 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 URB1O60287 2271 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 PCNX2A6NKB5 2137 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 ATMQ13315 3056 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 RP1L1Q8IWN7 2480 aaPredicted RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 AHCTF1Q8WYP5 2266 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 GOLGA8MH3BSY2 632 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 GSC2O15499 205 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SIN3BO75182 1162 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 RNASEH2AO75792 299 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 AP2A1O95782 977 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SERPINE1P05121 402 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 APRTP07741 180 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 POU2F2P09086 479 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TPBGLP0DKB5 382 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 PABPC1P11940 636 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 NDUFV2P19404 249 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 ITPKAP23677 461 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 EPHB2P29323 1055 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SPRP35270 261 aaPredicted RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 PLA2G5P39877 138 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SERPINB8P50452 374 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 CSRP3P50461 194 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 GALNT2Q10471 571 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TRIP4Q15650 581 aaPredicted RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 GSTA3Q16772 222 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 UGP2Q16851 508 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 BRMS1LQ5PSV4 323 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 NPNTQ6UXI9 565 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 PACS1Q6VY07 963 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 Q6ZVU0 165 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SETD3Q86TU7 594 aaPredicted RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TMEM135Q86UB9 458 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 LONP2Q86WA8 852 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 NUDCD3Q8IVD9 361 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 TP53INP2Q8IXH6 220 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 PPM1NQ8N819 430 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 OVCA2Q8WZ82 227 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 UTP4Q969X6 686 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 FAM111AQ96PZ2 611 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 GPR174Q9BXC1 333 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 IL22Q9GZX6 179 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 GBA3Q9H227 469 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 DHX35Q9H5Z1 703 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 PLAC1Q9HBJ0 212 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 NPHS2Q9NP85 383 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SLCO1B3Q9NPD5 702 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 OLA1Q9NTK5 396 aaKnown RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 NDE1Q9NXR1 346 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SLC17A7Q9P2U7 560 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SAE1Q9UBE0 346 aaPredicted RBP4.78□□□□□ -1.64
EDEM3-203ENST00000439962 HEY2Q9UBP5 337 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 OR12D3Q9UGF7 316 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 ANGPTL2Q9UKU9 493 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 SLCO1B1Q9Y6L6 691 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 STON1Q9Y6Q2 735 aa4.78□□□□□ -1.64
EDEM3-203ENST00000439962 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CCDC189A1A4V9 331 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 K7ESF4 209 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 FGF10O15520 208 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 ESRRAP11474 423 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms