RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 FUBP1Q96AE4 644 aaKnown RBP11.17□□□□□ -0.62
CSTF3-203ENST00000438862 ZNF212Q9UDV6 495 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 PCDHGA9Q9Y5G4 932 aaKnown RBP11.17□□□□□ -0.62
CSTF3-203ENST00000438862 ACTL7AQ9Y615 435 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 TNRC6AQ8NDV7 1962 aaKnown RBP11.17□□□□□ -0.62
CSTF3-203ENST00000438862 ADGRG4Q8IZF6 3080 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 ANKRD36A6QL64 1941 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 TRIM49BA6NDI0 452 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 POLR1CO15160 346 aaPredicted RBP11.16□□□□□ -0.62
CSTF3-203ENST00000438862 PPM1DO15297 605 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 SRGAP2O75044 1071 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 LRCH4O75427 683 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 F9P00740 461 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 PCCBP05166 539 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 FURINP09958 794 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 PRF1P14222 555 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 CSF2RBP32927 897 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 TRIM23P36406 574 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 STX17P56962 302 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 ILF3Q12906 894 aaKnown RBP eCLIP11.16□□□□□ -0.62
CSTF3-203ENST00000438862 CDKAL1Q5VV42 579 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 LYSMD3Q7Z3D4 306 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 ARHGAP22Q7Z5H3 698 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 ANKRD20A12PQ8NF67 263 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 ZNF606Q8WXB4 792 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 HMCESQ96FZ2 354 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 AHCYL2Q96HN2 611 aaKnown RBP11.16□□□□□ -0.62
CSTF3-203ENST00000438862 ZYG11BQ9C0D3 744 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 MLXIPLQ9NP71 852 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 SLAMF7Q9NQ25 335 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 TRNAU1APQ9NX07 287 aaKnown RBP11.16□□□□□ -0.62
CSTF3-203ENST00000438862 TMEM9Q9P0T7 183 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 TAAR2Q9P1P5 351 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 MOSPD1Q9UJG1 213 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 HPCAL4Q9UM19 191 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 MFHAS1Q9Y4C4 1052 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 PCDHGB7Q9Y5F8 929 aa11.16□□□□□ -0.62
CSTF3-203ENST00000438862 PDZD2O15018 2839 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 NF1P21359 2839 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 CDC14CA4D256 554 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 CFAP69A5D8W1 941 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 PMM2O15305 246 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 CREG1O75629 220 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 GRAP2O75791 330 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 LIG3P49916 1009 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 SNX16P57768 344 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 GCNT1Q02742 428 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 PDCLQ13371 301 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 ZRANB3Q5FWF4 1079 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 PAPD7Q5XG87 772 aaKnown RBP11.15□□□□□ -0.62
CSTF3-203ENST00000438862 ERAP2Q6P179 960 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 WDR74Q6RFH5 385 aaPredicted RBP11.15□□□□□ -0.62
CSTF3-203ENST00000438862 NRROSQ86YC3 692 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 HPS6Q86YV9 775 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 AOPEPQ8N6M6 819 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 PLA2G15Q8NCC3 412 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 SEC14L1Q92503 715 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 KAT5Q92993 513 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 GDAP1L1Q96MZ0 367 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 SLC25A23Q9BV35 468 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 TTYH3Q9C0H2 523 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 TWSG1Q9GZX9 223 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 ZMYND15Q9H091 742 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 RETREG1Q9H6L5 497 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 ANLNQ9NQW6 1124 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 PIGVQ9NUD9 493 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 FANCLQ9NW38 375 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 MAP10Q9P2G4 905 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 ARMCX3Q9UH62 379 aaPredicted RBP11.15□□□□□ -0.62
CSTF3-203ENST00000438862 CNTN6Q9UQ52 1028 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 CELSR1Q9NYQ6 3014 aa11.15□□□□□ -0.62
CSTF3-203ENST00000438862 PRSS38A1L453 326 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 PIPSLA2A3N6 862 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 HEATR9A2RTY3 570 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 A8MU76 341 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 I6L893 689 aaPredicted RBP11.14□□□□□ -0.63
CSTF3-203ENST00000438862 DPM1O60762 260 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 KATNA1O75449 491 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 CBX6O95503 412 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 IGSF6O95976 241 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 FMO5P49326 533 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 CETN1Q12798 172 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 UGP2Q16851 508 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 ZXDCQ2QGD7 858 aaPredicted RBP11.14□□□□□ -0.63
CSTF3-203ENST00000438862 ATXN7L2Q5T6C5 722 aaPredicted RBP11.14□□□□□ -0.63
CSTF3-203ENST00000438862 JMJD6Q6NYC1 403 aaPredicted RBP11.14□□□□□ -0.63
CSTF3-203ENST00000438862 C6orf15Q6UXA7 325 aaPredicted RBP11.14□□□□□ -0.63
CSTF3-203ENST00000438862 LUZP1Q86V48 1076 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 SLC47A2Q86VL8 602 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 GAS2L3Q86XJ1 694 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 TRIM59Q8IWR1 403 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 DRC7Q8IY82 874 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 NAGSQ8N159 534 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 OR10G6Q8NH81 332 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 CASKIN2Q8WXE0 1202 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 SLC35C1Q96A29 364 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 PGAP3Q96FM1 320 aaPredicted RBP11.14□□□□□ -0.63
CSTF3-203ENST00000438862 NPY6RQ99463 290 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 HSD3B7Q9H2F3 369 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 CARS2Q9HA77 564 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms