RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 NPIPB5A8MRT5 1133 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 EFCAB8A8MWE9 144 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 NPIPB4C9JG80 1138 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 CAPN9O14815 690 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 DDAH2O95865 285 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 PSMC4P43686 418 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 CDK7P50613 346 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 ACSM2AQ08AH3 577 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 SNTA1Q13424 505 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 ITPK1Q13572 414 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 CTTNQ14247 550 aaKnown RBP3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 ANGPT1Q15389 498 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 GXYLT1Q4G148 440 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 ATPAF1Q5TC12 328 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 TMEM268Q5VZI3 342 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 TRIM74Q86UV6 250 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 TRIM73Q86UV7 250 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 SCN4BQ8IWT1 228 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 SLC2A12Q8TD20 617 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 C2CD4CQ8TF44 421 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 STYXQ8WUJ0 223 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 SECISBP2LQ93073 1101 aaKnown RBP3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 TMEM18Q96B42 140 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 TXNDC15Q96J42 360 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 CADM1Q9BY67 442 aaKnown RBP3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 LHPPQ9H008 270 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 SEPSECSQ9HD40 501 aaKnown RBP3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 FNIP2Q9P278 1114 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 CNOT7Q9UIV1 285 aaKnown RBP3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 OSGIN2Q9Y236 505 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 RYR3Q15413 4870 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 KIF26BQ2KJY2 2108 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 DDX60Q8IY21 1712 aaKnown RBP3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 TTC21BQ7Z4L5 1316 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 MAP2P11137 1827 aaKnown RBP3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 PHIPQ8WWQ0 1821 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 CSPG4Q6UVK1 2322 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 IGLV5-37A0A075B6J1 123 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 SAA2-SAA4A0A096LPE2 208 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 A0A1B0GVM2 712 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 KDM4EB2RXH2 506 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 WDHD1O75717 1129 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 TNFRSF6BO95407 300 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 SERPINB2P05120 415 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 LYL1P12980 280 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 TM4SF1P30408 202 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 MXI1P50539 228 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 PRKCZQ05513 592 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 MYBPHQ13203 477 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 SPARCL1Q14515 664 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 NFRKBQ6P4R8 1299 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 OLFM4Q6UX06 510 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 ZNF771Q7L3S4 317 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 PATL1Q86TB9 770 aaKnown RBP3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 RBFAQ8N0V3 343 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 OR1N1Q8NGS0 311 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 SPATA20Q8TB22 786 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 FAM71BQ8TC56 605 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 ARRDC3Q96B67 414 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 C8orf48Q96LL4 319 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 IL17FQ96PD4 163 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 TEFMQ96QE5 360 aaKnown RBP3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 PIGSQ96S52 555 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 EPYCQ99645 322 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 BRD8Q9H0E9 1235 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 METTL14Q9HCE5 456 aaKnown RBP3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 MALT1Q9UDY8 824 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 DAPP1Q9UN19 280 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 RCE1Q9Y256 329 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 SLC45A1Q9Y2W3 748 aa3.01□□□□□ -1.93
HMGB1P18-201ENST00000438801 NPC1L1Q9UHC9 1359 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 LAMB1P07942 1786 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 USP42Q9H9J4 1324 aaKnown RBP3□□□□□ -1.93
HMGB1P18-201ENST00000438801 A0A0U1RQJ8 604 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 DYTNA2CJ06 578 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 GOLGA6L3A6NEY3 463 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 H3BQ06 376 aaPredicted RBP3□□□□□ -1.93
HMGB1P18-201ENST00000438801 SYN3O14994 580 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 KIF1CO43896 1103 aaKnown RBP3□□□□□ -1.93
HMGB1P18-201ENST00000438801 CCNT1O60563 726 aaKnown RBP3□□□□□ -1.93
HMGB1P18-201ENST00000438801 LMX1BO60663 402 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 CKMT1AP12532 417 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 DPP6P42658 865 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 PEX5P50542 639 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 RBM39Q14498 530 aaKnown RBP3□□□□□ -1.93
HMGB1P18-201ENST00000438801 HLTFQ14527 1009 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P18-201ENST00000438801 STARD3Q14849 445 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 RPS6KA2Q15349 733 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 GALNTL6Q49A17 601 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 CCDC181Q5TID7 509 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 IL31Q6EBC2 164 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 TYW3Q6IPR3 259 aaKnown RBP3□□□□□ -1.93
HMGB1P18-201ENST00000438801 AADACL2Q6P093 401 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 ZNF449Q6P9G9 518 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 GALNT7Q86SF2 657 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 EXOC3L1Q86VI1 746 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 TMC8Q8IU68 726 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 SCAIQ8N9R8 606 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 POC1AQ8NBT0 407 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 ZNF114Q8NC26 417 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms