RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 VCPIP1Q96JH7 1222 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 CATSPER2Q96P56 530 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 RAD9AQ99638 391 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 SEMA3CQ99985 751 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 SIKE1Q9BRV8 207 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZSCAN5AQ9BUG6 496 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLC46A2Q9BY10 475 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 CPEB1Q9BZB8 566 aaKnown RBP3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 GPR61Q9BZJ8 451 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 TINAGL1Q9GZM7 467 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 SH2D4AQ9H788 454 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 C8orf33Q9H7E9 229 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 PALMDQ9NP74 551 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 DNAJC11Q9NVH1 559 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 ARHGEF38Q9NXL2 777 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 KCMF1Q9P0J7 381 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 ANKMY1Q9P2S6 941 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 BAIAP2L1Q9UHR4 511 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 CCPG1Q9ULG6 757 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 SSX2IPQ9Y2D8 614 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 CARD8Q9Y2G2 431 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 PCDHB6Q9Y5E3 794 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 LIPGQ9Y5X9 500 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 DDX49Q9Y6V7 483 aaKnown RBP3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 GAKO14976 1311 aa3.68□□□□□ -1.82
HMGB1P12-201ENST00000438594 POLR2AP24928 1970 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 MYADML2A6NDP7 307 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 MFSD2BA6NFX1 497 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 OOEPA6NGQ2 149 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PRSS29PA6NIE9 313 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 SH2D7A6NKC9 451 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 AHRRA9YTQ3 701 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 KIF28PB7ZC32 967 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PSMD9O00233 223 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 GRM6O15303 877 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PAPSS1O43252 624 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 MTX2O75431 263 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 TAF5LO75529 589 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 IDH1O75874 414 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 NCR1O76036 304 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 RASAL1O95294 804 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 VNN2O95498 520 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 C1RP00736 705 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 GNAI2P04899 355 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 URODP06132 367 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 LIPFP07098 398 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 GALTP07902 379 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 ABHD2P08910 425 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 UBTFL6P0CB48 400 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 HPGDP15428 266 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 SP100P23497 879 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CHMLP26374 656 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PTBP1P26599 531 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLC5A2P31639 672 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CCT6AP40227 531 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 FASLGP48023 281 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PIK3CGP48736 1102 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLC11A2P49281 568 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 GPR15P49685 360 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CCR3P51677 355 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PLTPP55058 493 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 SNU13P55769 128 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 EIF3BP55884 814 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 WNT3AP56704 352 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CEBPZQ03701 1054 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 ATP1A4Q13733 1029 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 BYSLQ13895 437 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLC29A2Q14542 456 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 KARSQ15046 597 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 RRS1Q15050 365 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CEBPEQ15744 281 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 SGCBQ16585 318 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 FUT11Q495W5 492 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 LRRC23Q53EV4 343 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 HERC4Q5GLZ8 1057 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 TEX35Q5T0J7 233 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 ATAD3BQ5T9A4 648 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CDC73Q6P1J9 531 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 DENND1BQ6P3S1 775 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 AFTPHQ6ULP2 937 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CES3Q6UWW8 571 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 NHLRC1Q6VVB1 395 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CLEC17AQ6ZS10 378 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 Q6ZVL8 140 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 ADCK2Q7Z695 626 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 TRIM74Q86UV6 250 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 TRIM73Q86UV7 250 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLC22A9Q8IVM8 553 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 DENND6AQ8IWF6 608 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CD302Q8IX05 232 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 DHX40Q8IX18 779 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZNF366Q8N895 744 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CDYL2Q8N8U2 506 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 GBP7Q8N8V2 638 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 EIF1ADQ8N9N8 165 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 TC2NQ8N9U0 490 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 CAMKVQ8NCB2 501 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 FBXO18Q8NFZ0 1043 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PSMA8Q8TAA3 256 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 LRRC8CQ8TDW0 803 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms