RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 VPS28Q9UK41 221 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 RCOR1Q9UKL0 485 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 CEPT1Q9Y6K0 416 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 ATXN2Q99700 1313 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 RSF1Q96T23 1441 aaPredicted RBP3.71□□□□□ -1.81
TRAPPC13-204ENST00000438419 AKR1B15C9JRZ8 316 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 MLYCDO95822 493 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 IGHV4-30-4P0DP06 118 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 FCGR1AP12314 374 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 RARGP13631 454 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 TKTP29401 623 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 STX2P32856 288 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 HOXD13P35453 343 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 METAP2P50579 478 aaKnown RBP eCLIP3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 SEC61A1P61619 476 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 ZXDBP98169 803 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 EFNB3Q15768 340 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 AMZ1Q400G9 498 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 CXorf66Q5JRM2 361 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 FAM69BQ5VUD6 431 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 GGNBP1Q5YKI7 109 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 TTI2Q6NXR4 508 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 ANKRD54Q6NXT1 300 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 NCEH1Q6PIU2 408 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 CYP20A1Q6UW02 462 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 WASF1Q92558 559 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 SGCDQ92629 289 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 NEUROG1Q92886 237 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 ARHGEF2Q92974 986 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 MTBPQ96DY7 904 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 HARBI1Q96MB7 349 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 MEIS3Q99687 375 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 CENPOQ9BU64 300 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 NDST4Q9H3R1 872 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 SYNCQ9H7C4 482 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 C17orf75Q9HAS0 396 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 GPR108Q9NPR9 543 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 HINT3Q9NQE9 182 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 CNGB3Q9NQW8 809 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 HCFC1R1Q9NWW0 138 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 ADD3Q9UEY8 706 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 SLCO3A1Q9UIG8 710 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 ZNF215Q9UL58 517 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 LYVE1Q9Y5Y7 322 aa3.71□□□□□ -1.82
TRAPPC13-204ENST00000438419 IGLV5-52A0A0A0MRZ9 124 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 A0A1W2PQF6 199 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 CPED1A4D0V7 1026 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 LIPT2A6NK58 231 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 PTGES3LE9PB15 166 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 AHCYL1O43865 530 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 SLC28A2O43868 658 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 EIF2S1P05198 315 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 CYC1P08574 325 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 ALOX12P18054 663 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 TNFRSF8P28908 595 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 ACTN2P35609 894 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 HADHAP40939 763 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 COMPP49747 757 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 PEX5P50542 639 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 F2RL1P55085 397 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 BNC1Q01954 994 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 NIPAL4Q0D2K0 466 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 C2orf68Q2NKX9 166 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 RILPL1Q5EBL4 403 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 C16orf54Q6UWD8 224 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 B3GNT6Q6ZMB0 384 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 PQLC2Q6ZP29 291 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 CREB3L2Q70SY1 520 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 TAOK1Q7L7X3 1001 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 ARHGAP12Q8IWW6 846 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 SPATA6LQ8N4H0 392 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 WDTC1Q8N5D0 677 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 SCFD2Q8WU76 684 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 POMGNT1Q8WZA1 660 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 ARHGEF26Q96DR7 871 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 MED30Q96HR3 178 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 RSRC1Q96IZ7 334 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 WDFY2Q96P53 400 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 KXD1Q9BQD3 176 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 HAUS8Q9BT25 410 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 C1QTNF5Q9BXJ0 243 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 TM6SF1Q9BZW5 370 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 CCDC68Q9H2F9 335 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 CD93Q9NPY3 652 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 NSMCE4AQ9NXX6 385 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 ZNF580Q9UK33 172 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 FAM237AA0A1B0GTK4 181 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 hDV102S1A0JD36 115 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 MYO1GB0I1T2 1018 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 VILLO15195 856 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 NDUFS7O75251 213 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 NDUFS3O75489 264 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 SLC25A12O75746 678 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 NKX2-2O95096 273 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 FTCDO95954 541 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 RRM1P23921 792 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 ITGB8P26012 769 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 CCKBRP32239 447 aa3.7□□□□□ -1.82
TRAPPC13-204ENST00000438419 EIF2S3P41091 472 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms