RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 CD72P21854 359 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 CD70P32970 193 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 HOXD12P35452 270 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 TNFRSF4P43489 277 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 ASMTP46597 345 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 CCT5P48643 541 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 IRAK1P51617 712 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 ARSEP51690 589 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 NDST2P52849 883 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 DYNLT1P63172 113 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 GNA12Q03113 381 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 SULT2A1Q06520 285 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 SEMA3BQ13214 749 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 TUBA3CQ13748 450 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 DPYSL3Q14195 570 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 EIF4HQ15056 248 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 OASLQ15646 514 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 ANKRD20A8PQ5CZ79 823 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 TMEM196Q5HYL7 178 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 PITRM1Q5JRX3 1037 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 INTS11Q5TA45 600 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 ZBTB37Q5TC79 503 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 MBLAC2Q68D91 279 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 RETSATQ6NUM9 610 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 SPOCD1Q6ZMY3 1216 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 DGLUCYQ7Z3D6 616 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 TRMT11Q7Z4G4 463 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 DCAF4L2Q8NA75 395 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 RAPGEF5Q92565 580 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 SGCDQ92629 289 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 KRT35Q92764 455 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 COG8Q96MW5 612 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 RNF157Q96PX1 679 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 DEPDC7Q96QD5 511 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 RUFY1Q96T51 708 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 FERMT1Q9BQL6 677 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 SLC13A1Q9BZW2 595 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 NSRP1Q9H0G5 558 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 MIR1-1HGQ9H1L0 117 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 MAGEH1Q9H213 219 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 VPS37BQ9H9H4 285 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 LMAN1LQ9HAT1 526 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 HAUS2Q9NVX0 235 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 NKIRAS2Q9NYR9 191 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 CLEC4EQ9ULY5 219 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 PLA2G4CQ9UP65 541 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 TBC1D30Q9Y2I9 924 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 ZKSCAN5Q9Y2L8 839 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 MTF2Q9Y483 593 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 CTAGE9A4FU28 777 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 ZSCAN5CA6NGD5 496 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 USP27XA6NNY8 438 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CBX4O00257 560 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 DCLK1O15075 740 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 NPC1O15118 1278 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 TRIM24O15164 1050 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 TTI1O43156 1089 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CST8O60676 142 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 IL33O95760 270 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 GUCA1CO95843 209 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 WNT11O96014 354 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 EGFP01133 1207 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CAPNS1P04632 268 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 SRPRAP08240 638 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 VIMP08670 466 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CD48P09326 243 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 ATF4P18848 351 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 TGM2P21980 687 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 HLA-FP30511 346 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 GALNSP34059 522 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 HSD17B2P37059 387 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CD86P42081 329 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CDKN2BP42772 138 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 MAGEA9P43362 315 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 RECQLP46063 649 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 MARCKSL1P49006 195 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CCNHP51946 323 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 BLVRAP53004 296 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 PLK1P53350 603 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 RACK1P63244 317 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 MRPS21P82921 87 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 ECT2LQ008S8 904 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 DMPKQ09013 629 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 BNIP1Q12981 228 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 GPS2Q13227 327 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 MPP3Q13368 585 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 DPYSQ14117 519 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 PAFAH1B3Q15102 231 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 LLGL1Q15334 1064 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 ELF2Q15723 593 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 PPP2R5EQ16537 467 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 GEN1Q17RS7 908 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 GAB4Q2WGN9 574 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 PARP15Q460N3 678 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 FUT11Q495W5 492 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 ACCSLQ4AC99 568 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 HSF5Q4G112 596 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 FNDC3BQ53EP0 1204 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 SETMARQ53H47 684 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 FSCBQ5H9T9 825 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms