RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 ARL14Q8N4G2 192 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 NIPA2Q8N8Q9 360 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 OR6C4Q8NGE1 309 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 COQ10AQ96MF6 247 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CSPG4P5Q96PW8 444 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 MGME1Q9BQP7 344 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 FUCA2Q9BTY2 467 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 LGR4Q9BXB1 951 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 WDR26Q9H7D7 661 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CPNE5Q9HCH3 593 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 B4GALT6Q9UBX8 382 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 APPL1Q9UKG1 709 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 FLNBO75369 2602 aaKnown RBP9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 AHCTF1Q8WYP5 2266 aa9.43□□□□□ -0.9
CDC42-IT1-201ENST00000431803 A0A1W2PQ67 120 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PLD2O14939 933 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 NOBOXO60393 691 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 HEXIM1O94992 359 aaKnown RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TNFSF15O95150 251 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 RPLP0P05388 317 aaKnown RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 RARAP10276 462 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 MYCLP1P12525 358 aaPredicted RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SKILP12757 684 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PNLIPP16233 465 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 GLB1P16278 677 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CCKBRP32239 447 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PBX1P40424 430 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ARL4AP40617 200 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CCL7P80098 99 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 RHDQ02161 417 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SLC25A11Q02978 314 aaKnown RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 C19orf57Q0VDD7 668 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 EIF3IQ13347 325 aaKnown RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PIGHQ14442 188 aaPredicted RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 HLTFQ14527 1009 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ZNF235Q14590 738 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CNGA3Q16281 694 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 RALGPS1Q5JS13 557 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TXNRD3NBQ6F5E7 133 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PNCKQ6P2M8 343 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TEKT4Q8WW24 435 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 HSPH1Q92598 858 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SYN2Q92777 582 aaPredicted RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CCDC97Q96F63 343 aaPredicted RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 WBP1Q96G27 269 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 GFM1Q96RP9 751 aaKnown RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 MCCC1Q96RQ3 725 aaPredicted RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 NUDCD1Q96RS6 583 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TEX101Q9BY14 249 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TMEM168Q9H0V1 697 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SYNDIG1Q9H7V2 258 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 NOD2Q9HC29 1040 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PCDH18Q9HCL0 1135 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 MRPL40Q9NQ50 206 aaKnown RBP9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 MYO1AQ9UBC5 1043 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ACSL6Q9UKU0 697 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PCDHGC4Q9Y5F7 938 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PCDHGA7Q9Y5G6 932 aa9.42□□□□□ -0.9
CDC42-IT1-201ENST00000431803 A0A1W2PQJ5 194 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PRSS38A1L453 326 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 A8MX80 341 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TMX2-CTNND1H3BSU7 103 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 K7ENP7 123 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PDE2AO00408 941 aaPredicted RBP9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 NUDT21O43809 227 aaKnown RBP9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PGLSO95336 258 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CPP00450 1065 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SERPINC1P01008 464 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 LHCGRP22888 699 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 AMPD1P23109 780 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 IL4RP24394 825 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 VIPR1P32241 457 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SERPINB6P35237 376 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 UGT1A5P35504 534 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 INHBCP55103 352 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CDH6P55285 790 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 RELBQ01201 579 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 VAC14Q08AM6 782 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TRAF2Q12933 501 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CLN3Q13286 438 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ACOX1Q15067 660 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 C14orf28Q4W4Y0 310 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ARHGAP40Q5TG30 622 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CAVIN1Q6NZI2 390 aaKnown RBP9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 INO80CQ6PI98 192 aaPredicted RBP9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 RAB11FIP2Q7L804 512 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ZNF438Q7Z4V0 828 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SPRED1Q7Z699 444 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TAF8Q7Z7C8 310 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 C17orf82Q86X59 251 aaPredicted RBP9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CCNJLQ8IV13 435 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SFTPA2Q8IWL1 248 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ZNF843Q8N446 348 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ATPAF2Q8N5M1 289 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TEX26Q8N6G2 289 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PAF1Q8N7H5 531 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 FAM46DQ8NEK8 389 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CCL4L1Q8NHW4 92 aa9.41□□□□□ -0.9
CDC42-IT1-201ENST00000431803 FAM71BQ8TC56 605 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms