RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 GDPD3Q7L5L3 318 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 ZBTB33Q86T24 672 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 HORMAD1Q86X24 394 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 CCNYL1Q8N7R7 359 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 CERKQ8TCT0 537 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 BPIFB1Q8TDL5 484 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 LRRN4Q8WUT4 740 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 ZNF566Q969W8 418 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 AKT1S1Q96B36 256 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 ST6GAL2Q96JF0 529 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 FCRL3Q96P31 734 aaPredicted RBP16.08■□□□□ 0.17
C9orf3-206ENST00000428313 MAP10Q9P2G4 905 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.17
C9orf3-206ENST00000428313 C2CD4BA6NLJ0 364 aa16.08■□□□□ 0.16
C9orf3-206ENST00000428313 SLC1A7O00341 560 aa16.08■□□□□ 0.16
C9orf3-206ENST00000428313 PRSS23O95084 383 aa16.08■□□□□ 0.16
C9orf3-206ENST00000428313 CCDC159P0C7I6 412 aa16.08■□□□□ 0.16
C9orf3-206ENST00000428313 DDX5P17844 614 aaKnown RBP16.08■□□□□ 0.16
C9orf3-206ENST00000428313 TAGLNQ01995 201 aaKnown RBP16.08■□□□□ 0.16
C9orf3-206ENST00000428313 EIF2B5Q13144 721 aaKnown RBP16.08■□□□□ 0.16
C9orf3-206ENST00000428313 SH3PXD2AQ5TCZ1 1133 aa16.08■□□□□ 0.16
C9orf3-206ENST00000428313 FUNDC1Q8IVP5 155 aa16.08■□□□□ 0.16
C9orf3-206ENST00000428313 FSTL5Q8N475 847 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-206ENST00000428313 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.08■□□□□ 0.16
C9orf3-206ENST00000428313 VPS39Q96JC1 886 aa16.08■□□□□ 0.16
C9orf3-206ENST00000428313 RIPOR3Q96MK2 946 aa16.08■□□□□ 0.16
C9orf3-206ENST00000428313 GPR22Q99680 433 aa16.08■□□□□ 0.16
C9orf3-206ENST00000428313 RPRD1BQ9NQG5 326 aaKnown RBP16.08■□□□□ 0.16
C9orf3-206ENST00000428313 STAP1Q9ULZ2 295 aa16.08■□□□□ 0.16
C9orf3-206ENST00000428313 CNTNAP1P78357 1384 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 FXYD1O00168 92 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 TSPAN9O75954 239 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 TRIM16O95361 564 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 ENPP1P22413 925 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 JAK3P52333 1124 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 TPD52P55327 224 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-206ENST00000428313 EMX1Q04741 257 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-206ENST00000428313 MEP1AQ16819 746 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 FAM102AQ5T9C2 384 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-206ENST00000428313 CNSTQ6PJW8 725 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 VN1R5Q7Z5H4 357 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 PLD3Q8IV08 490 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 CELF2-AS1Q8N7Q2 184 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 PSD4Q8NDX1 1056 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 ZNF555Q8NEP9 628 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 MARVELD3Q96A59 401 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 GON7Q9BXV9 100 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 FAM49AQ9H0Q0 323 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-206ENST00000428313 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 FAM118AQ9NWS6 357 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 HOXC10Q9NYD6 342 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 RUVBL2Q9Y230 463 aaKnown RBP16.07■□□□□ 0.16
C9orf3-206ENST00000428313 SIP14410 1827 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 HACD1B0YJ81 288 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 UBXN8O00124 270 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 MDM4O15151 490 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 SNX4O95219 450 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 PIGRP01833 764 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 SLC6A2P23975 617 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 GPLD1P80108 840 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 PIGFQ07326 219 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 SMAD1Q15797 465 aaKnown RBP16.07■□□□□ 0.16
C9orf3-206ENST00000428313 CTU2Q2VPK5 515 aaKnown RBP16.07■□□□□ 0.16
C9orf3-206ENST00000428313 ZNF404Q494X3 552 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 COQ5Q5HYK3 327 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 OTUD3Q5T2D3 398 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-206ENST00000428313 SYT6Q5T7P8 510 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-206ENST00000428313 CES3Q6UWW8 571 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 RIOX2Q8IUF8 465 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 CADM2Q8N3J6 435 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 COLGALT1Q8NBJ5 622 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 OR9I1Q8NGQ6 314 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 HTR3CQ8WXA8 447 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 RXFP2Q8WXD0 754 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 ZNF669Q96BR6 464 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-206ENST00000428313 AGAP2Q99490 1192 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 TOR3AQ9H497 397 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 C12orf4Q9NQ89 552 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 ACOXLQ9NUZ1 547 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 PCDHA9Q9Y5H5 950 aa16.07■□□□□ 0.16
C9orf3-206ENST00000428313 H0Y626 953 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 YES1P07947 543 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 CD19P15391 556 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 PDGFRAP16234 1089 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 GPX3P22352 226 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 CYP2F1P24903 491 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 ALDH4A1P30038 563 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 C1QTNF8P60827 252 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 GBE1Q04446 702 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 PRKCDQ05655 676 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 RAD51Q06609 339 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 FADDQ13158 208 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 PPP1R3AQ16821 1122 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 COLEC12Q5KU26 742 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 TSTD2Q5T7W7 516 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 TMEM135Q86UB9 458 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 FAM83FQ8NEG4 500 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-206ENST00000428313 MCPH1Q8NEM0 835 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 LRCH3Q96II8 777 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 RNF170Q96K19 258 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms