RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CPNE1Q99829 537 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 WDR83Q9BRX9 315 aaKnown RBP10.33□□□□□ -0.76
MDC1-205ENST00000425072 MFRPQ9BY79 579 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 CENPHQ9H3R5 247 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 MFSD1Q9H3U5 465 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 PCDH12Q9NPG4 1184 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 PKD2L2Q9NZM6 624 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 BCCIPQ9P287 314 aaKnown RBP eCLIP10.33□□□□□ -0.76
MDC1-205ENST00000425072 ZNF180Q9UJW8 692 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 SARDHQ9UL12 918 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 HCN4Q9Y3Q4 1203 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 SLC30A1Q9Y6M5 507 aa10.33□□□□□ -0.76
MDC1-205ENST00000425072 TCF20Q9UGU0 1960 aaKnown RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 AGPSO00116 658 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 AURKAO14965 403 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 CD3EAPO15446 510 aaKnown RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 TSPAN6O43657 245 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 AP1G1O43747 822 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 ADAM23O75077 832 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 SNRPAP09012 282 aaKnown RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 ADRB3P13945 408 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 PMLP29590 882 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 PSMD8P48556 350 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 CSE1LP55060 971 aaKnown RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 RPS14P62263 151 aaKnown RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 TMPRSS15P98073 1019 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 CRY1Q16526 586 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 TTC31Q49AM3 519 aaPredicted RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 GPR33Q49SQ1 333 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 TMEM52BQ4KMG9 183 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 AARS2Q5JTZ9 985 aaKnown RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 IER5LQ5T953 404 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 AGBL2Q5U5Z8 902 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 NEK5Q6P3R8 708 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 TRMT10BQ6PF06 316 aaKnown RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 AFTPHQ6ULP2 937 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 USP30Q70CQ3 517 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 MARK2Q7KZI7 788 aaKnown RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 DPPA4Q7L190 304 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 SYT13Q7L8C5 426 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 LYSMD3Q7Z3D4 306 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 GALNT7Q86SF2 657 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 RASSF3Q86WH2 238 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 ZSWIM9Q86XI8 627 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 CNTN4Q8IWV2 1026 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 HDDC3Q8N4P3 179 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 OR13J1Q8NGT2 312 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 GANCQ8TET4 914 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 ARRDC3Q96B67 414 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 SIPA1Q96FS4 1042 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 PAFAH2Q99487 392 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 SH3GL2Q99962 352 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 TMBIM4Q9HC24 238 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 LTB4R2Q9NPC1 389 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 IARS2Q9NSE4 1012 aaKnown RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 SENP1Q9P0U3 644 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 PSMC3IPQ9P2W1 217 aaPredicted RBP10.32□□□□□ -0.76
MDC1-205ENST00000425072 B4GALT6Q9UBX8 382 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 SLC2A6Q9UGQ3 507 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 KCTD3Q9Y597 815 aa10.32□□□□□ -0.76
MDC1-205ENST00000425072 CKAP5Q14008 2032 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 A0A1W2PQF6 199 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 CCDC162PA2VCL2 907 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 KRBA1A5PL33 1030 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 NPIPB15A6NHN6 443 aaPredicted RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 SHISA7A6NL88 538 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 A8MX80 341 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 HMGB1P1B2RPK0 211 aaPredicted RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 AREL1O15033 823 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 MID1O15344 667 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 BUD23O43709 281 aaKnown RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 ELFN1P0C7U0 828 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 SPAM1P38567 509 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 GP5P40197 560 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 SPINT3P49223 89 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 TTPAP49638 278 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 ZNF140P52738 457 aaPredicted RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 STC1P52823 247 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 CACNG1Q06432 222 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 CNTN1Q12860 1018 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 ITGA9Q13797 1035 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 UBXN2BQ14CS0 331 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 LRRC66Q68CR7 880 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 LIPIQ6XZB0 460 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 PARS2Q7L3T8 475 aaKnown RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 PTAR1Q7Z6K3 402 aaPredicted RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 STRA8Q7Z7C7 330 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 SIX5Q8N196 739 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 OTUD6BQ8N6M0 293 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 C2CD4AQ8NCU7 369 aaPredicted RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 OR13C4Q8NGS5 318 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 ZNF398Q8TD17 642 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 CXorf40AQ8TE69 158 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 MRRFQ96E11 262 aaKnown RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 DNAJC1Q96KC8 554 aaKnown RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 PLEKHG4BQ96PX9 1271 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 TRIM56Q9BRZ2 755 aaKnown RBP10.31□□□□□ -0.76
MDC1-205ENST00000425072 DHRS4Q9BTZ2 278 aa10.31□□□□□ -0.76
MDC1-205ENST00000425072 C1QTNF1Q9BXJ1 281 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms