RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CAPN3P20807 821 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ARNTP27540 789 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 KRT76Q01546 638 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CHRNEQ04844 493 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 VAC14Q08AM6 782 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 HSDL1Q3SXM5 330 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 INTS11Q5TA45 600 aaKnown RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 SLX4IPQ5VYV7 408 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 NCBP2-AS2Q69YL0 99 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 MFSD6LQ8IWD5 586 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 SYTL1Q8IYJ3 562 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ANKRD13AQ8IZ07 590 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 LRRC71Q8N4P6 559 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 TP53I13Q8NBR0 393 aaPredicted RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 SPATA13Q96N96 652 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 CLSTN3Q9BQT9 956 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 TTYH2Q9BSA4 534 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 BEX2Q9BXY8 128 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 SMOC2Q9H3U7 446 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ARMC1Q9NVT9 282 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 KLHL8Q9P2G9 620 aaPredicted RBP11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 UTS2RQ9UKP6 389 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 RABL2BQ9UNT1 228 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 ADGRA2Q96PE1 1338 aa11.3□□□□□ -0.6
SEC61A1-202ENST00000424880 RAD51BO15315 384 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 USP2O75604 605 aaPredicted RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 STBD1O95210 358 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 SEC24AO95486 1093 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 CPNE6O95741 557 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 AHSGP02765 367 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 MAGEA6P43360 314 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 GP2P55259 537 aaKnown RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 PITX1P78337 314 aaPredicted RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 IFRD2Q12894 506 aaPredicted RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 INPP5AQ14642 412 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 LAPTM4AQ15012 233 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 HERC3Q15034 1050 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 UGT3A2Q3SY77 523 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 ZNF667Q5HYK9 610 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 PELI3Q8N2H9 469 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 DTX3Q8N9I9 347 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 CNIH3Q8TBE1 160 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 ZBED3Q96IU2 234 aaPredicted RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 NECTIN4Q96NY8 510 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 KCTD15Q96SI1 283 aaPredicted RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 C6orf62Q9GZU0 229 aaPredicted RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 ATXN3LQ9H3M9 355 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 PRDM12Q9H4Q4 367 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 RMND5AQ9H871 391 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 PAK1IP1Q9NWT1 392 aaPredicted RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 RIPK3Q9Y572 518 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 NFKBIEO00221 500 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 PGK1P00558 417 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 PRKCAP17252 672 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 CRHBPP24387 322 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 CTU2Q2VPK5 515 aaKnown RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 SCIMPQ6UWF3 145 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 ARMC8Q8IUR7 673 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 MFSD4AQ8N468 514 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 ANKRD52Q8NB46 1076 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 MCPH1Q8NEM0 835 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 DUS3LQ96G46 650 aaKnown RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 HSFY1Q96LI6 401 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 KCNA7Q96RP8 456 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 SLC30A3Q99726 388 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 C1QTNF1Q9BXJ1 281 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 PRRG3Q9BZD7 231 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 PDZD7Q9H5P4 517 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 LRRC40Q9H9A6 602 aa11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 GPN2Q9H9Y4 310 aaPredicted RBP11.29□□□□□ -0.6
SEC61A1-202ENST00000424880 LRRC14BA6NHZ5 514 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 GOLGA8CPA6NN73 597 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 SLC22A2O15244 555 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 ICMTO60725 284 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 RFPL2O75678 378 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 FYNP06241 537 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 NFICP08651 508 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 LCP1P13796 627 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 JAK3P52333 1124 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 SLC12A2P55011 1212 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 TRAP1Q12931 704 aaKnown RBP11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 SMU1Q2TAY7 513 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 BOLA3Q53S33 107 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 TMTC4Q5T4D3 741 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 IRAK1BP1Q5VVH5 260 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 STEAP3Q658P3 488 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 LINC00523Q86TU6 105 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 RBM23Q86U06 439 aaKnown RBP11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 CADM2Q8N3J6 435 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 HEXDCQ8WVB3 486 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 ZUFSPQ96AP4 578 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 PDCD2LQ9BRP1 358 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 CHID1Q9BWS9 393 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 MORF4L1Q9UBU8 362 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 COL2A1P02458 1487 aaPredicted RBP11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 SPATA31C2B4DYI2 1134 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 UBFD1O14562 309 aaKnown RBP11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 MED7O43513 233 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 SCO2O43819 266 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms