RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 TMEFF2Q9UIK5 374 aaPredicted RBP4.47□□□□□ -1.69
GPCPD1-202ENST00000418646 PCTPQ9UKL6 214 aa4.47□□□□□ -1.69
GPCPD1-202ENST00000418646 PCDHB3Q9Y5E6 796 aa4.47□□□□□ -1.69
GPCPD1-202ENST00000418646 SLC30A1Q9Y6M5 507 aa4.47□□□□□ -1.69
GPCPD1-202ENST00000418646 MYBPHLA2RUH7 354 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 TMEM233B4DJY2 109 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 EEF2KO00418 725 aaKnown RBP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 SEC14L5O43304 696 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 KERAO60938 352 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 PDE5AO76074 875 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 GPIP06744 558 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 PDHA1P08559 390 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 RPS3P23396 243 aaKnown RBP eCLIP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 EPHX2P34913 555 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 LIMS1P48059 325 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 HLCSP50747 726 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 CLCN7P51798 805 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 EEFSECP57772 596 aaKnown RBP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 IRX4P78413 519 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 CTF1Q16619 201 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 UGP2Q16851 508 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 CTSL3PQ5NE16 218 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 GJC2Q5T442 439 aaPredicted RBP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 ITPRIPL1Q6GPH6 555 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 ESRP1Q6NXG1 681 aaKnown RBP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 ARHGAP22Q7Z5H3 698 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 CAMKMTQ7Z624 323 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 FAM131BQ86XD5 332 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 DENND6AQ8IWF6 608 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 CEP70Q8NHQ1 597 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 NDRG1Q92597 394 aaKnown RBP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 USP7Q93009 1102 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 AGAP3Q96P47 875 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 DDX50Q9BQ39 737 aaKnown RBP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 CENPKQ9BS16 269 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 ULBP1Q9BZM6 244 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 YIPF3Q9GZM5 350 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 DHX35Q9H5Z1 703 aaKnown RBP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 WDR55Q9H6Y2 383 aaPredicted RBP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 RC3H2Q9HBD1 1191 aaKnown RBP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 SPAG4Q9NPE6 437 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 RIC8BQ9NVN3 520 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 PAK1IP1Q9NWT1 392 aaPredicted RBP4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 ZIM2Q9NZV7 527 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 KLHL42Q9P2K6 505 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 SLC8A2Q9UPR5 921 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 ERVW-1Q9UQF0 538 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 DTNAQ9Y4J8 743 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 HEY1Q9Y5J3 304 aa4.46□□□□□ -1.69
GPCPD1-202ENST00000418646 C2orf16Q68DN1 1984 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 FAM95CA0A1B0GW59 222 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 LCHNA4D1U4 455 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 A8MVJ9 347 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 INO80B-WBP1J3KQ70 363 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 NDUFS2O75306 463 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 RSL1D1O76021 490 aaKnown RBP4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 ENO2P09104 434 aaPredicted RBP4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 PMLP29590 882 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 OXTRP30559 389 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 STC1P52823 247 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 MTAPQ13126 283 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 SERINC3Q13530 473 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 GGTA1PQ4G0N0 100 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 LAIR1Q6GTX8 287 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 PRMT9Q6P2P2 845 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 TRIM67Q6ZTA4 783 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 ZNF551Q7Z340 670 aaPredicted RBP4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 TSEN54Q7Z6J9 526 aaKnown RBP4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 ZFAND4Q86XD8 727 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 SLC22A9Q8IVM8 553 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 CMTR2Q8IYT2 770 aaKnown RBP4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 DCP1BQ8IZD4 617 aaKnown RBP4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 MFSD4AQ8N468 514 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 TTC30BQ8N4P2 665 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 SLC25A41Q8N5S1 370 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 APPL2Q8NEU8 664 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 OR2T34Q8NGX1 318 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 OR2T3Q8NH03 318 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 PROKR1Q8TCW9 393 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 KCTD4Q8WVF5 259 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 APOBEC4Q8WW27 367 aaKnown RBP4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 YIPF6Q96EC8 236 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 MOCOSQ96EN8 888 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 LYSMD1Q96S90 227 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 MPHOSPH6Q99547 160 aaKnown RBP4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 SLC30A3Q99726 388 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 AARSD1Q9BTE6 412 aaKnown RBP4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 SMPD4Q9NXE4 827 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 STAP1Q9ULZ2 295 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 PCDHGA11Q9Y5H2 935 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 PMF1-BGLAPU3KQ54 211 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 CKAP5Q14008 2032 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 CROCCQ5TZA2 2017 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 H3BMQ9 156 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 CLDN5O00501 218 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 DYNC1LI2O43237 492 aaPredicted RBP4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 PRAMEF11O60813 436 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 BAIAP3O94812 1187 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 NDST3O95803 873 aa4.46□□□□□ -1.7
GPCPD1-202ENST00000418646 ABCB1P08183 1280 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms