RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 MRPL57Q9BQC6 102 aaKnown RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 WDR70Q9NW82 654 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 GPR182O15218 404 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 OR1I1O60431 355 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 SYNCRIPO60506 623 aaKnown RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 SMIM18P0DKX4 95 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 ELK4P28324 431 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 DGKEP52429 567 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 SH3BP2P78314 561 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 SFSWAPQ12872 951 aaKnown RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 MTA1Q13330 715 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 ITGADQ13349 1161 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 PABPC1LQ4VXU2 614 aaKnown RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 SLC44A4Q53GD3 710 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 GALNT5Q7Z7M9 940 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 OR10T2Q8NGX3 314 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 CENPIQ92674 756 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 KRT87PA6NCN2 255 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 E9PAM4 449 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 UBFD1O14562 309 aaKnown RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 SNAP29O95721 258 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 GLP2RO95838 553 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 PABPC4LP0CB38 370 aaKnown RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 RPL17P18621 184 aaKnown RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 PSMA4P25789 261 aaKnown RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 PCSK1P29120 753 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 PNPLA4P41247 253 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 UFM1P61960 85 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 CMPK2Q5EBM0 449 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 MFSD4BQ5TF39 518 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 PLEKHH3Q7Z736 793 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 ZNF410Q86VK4 478 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 PCYOX1LQ8NBM8 494 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 OR4K2Q8NGD2 314 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 GIPC3Q8TF64 312 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 TWIST2Q8WVJ9 160 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 KCTD14Q9BQ13 255 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 C17orf80Q9BSJ5 609 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 RSL24D1Q9UHA3 163 aaKnown RBP13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 RNF11Q9Y3C5 154 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 PCDHGA7Q9Y5G6 932 aa13.2□□□□□ -0.3
TNFRSF8-203ENST00000417814 A0A0D9SEW6 157 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 CXCL11O14625 94 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 DIRAS1O95057 198 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 GOT2P00505 430 aaKnown RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 KCNK10P57789 538 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 FPGSQ05932 587 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 SH3D19Q5HYK7 790 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 OGFRL1Q5TC84 451 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 FRA10AC1Q70Z53 315 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 SLC22A15Q8IZD6 547 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 ST13P5Q8NFI4 369 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 PTERQ96BW5 349 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 RERGLQ9H628 205 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 GMIPQ9P107 970 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 TRHDEQ9UKU6 1024 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 PNMA8BQ9ULN7 279 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 NIPSNAP2O75323 286 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 CELF2O95319 508 aaKnown RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 MYL4P12829 197 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 ZNF182P17025 639 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 NR6A1Q15406 480 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 TAF1CQ15572 869 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 PIWIL4Q7Z3Z4 852 aaKnown RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 FBXO39Q8N4B4 442 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 PRICKLE1Q96MT3 831 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 CATSPERBQ9H7T0 1116 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 LATS2Q9NRM7 1088 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 RIMS3Q9UJD0 308 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 BPTFQ12830 3046 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 CCDC162PA2VCL2 907 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 TMEM114B3SHH9 223 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 SLC2A3P11169 496 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 IL7RP16871 459 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 ARNTP27540 789 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 SH3BGRP55822 239 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 POLD3Q15054 466 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 PAFAH1B3Q15102 231 aaKnown RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 SLC2A7Q6PXP3 512 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 BNIPLQ7Z465 357 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 BRI3BPQ8WY22 251 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 MRGPRX2Q96LB1 330 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 GPR21Q99679 349 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 MYOCQ99972 504 aa13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 INTS7Q9NVH2 962 aaKnown RBP13.19□□□□□ -0.3
TNFRSF8-203ENST00000417814 TNPO2O14787 897 aaKnown RBP13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 CLASP2O75122 1294 aaKnown RBP13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 FASP25445 335 aa13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 NR1H2P55055 460 aa13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 IL27RAQ6UWB1 636 aa13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 LZTR1Q8N653 840 aa13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 CLDN19Q8N6F1 224 aa13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 SDCCAG3Q96C92 435 aa13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 AURKBQ96GD4 344 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 TEX37Q96LM6 180 aa13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 HGH1Q9BTY7 390 aa13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 VRTNQ9H8Y1 702 aa13.18□□□□□ -0.3
TNFRSF8-203ENST00000417814 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms