RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 ELLP55199 621 aaPredicted RBP3.1□□□□□ -1.91
APP-207ENST00000415997 LILRA4P59901 499 aa3.1□□□□□ -1.91
APP-207ENST00000415997 CD69Q07108 199 aa3.1□□□□□ -1.91
APP-207ENST00000415997 PPP2R5CQ13362 524 aa3.1□□□□□ -1.91
APP-207ENST00000415997 TP53BP2Q13625 1128 aa3.1□□□□□ -1.91
APP-207ENST00000415997 DRAP1Q14919 205 aaPredicted RBP3.1□□□□□ -1.91
APP-207ENST00000415997 GEN1Q17RS7 908 aa3.1□□□□□ -1.91
APP-207ENST00000415997 LONRF2Q1L5Z9 754 aa3.1□□□□□ -1.91
APP-207ENST00000415997 DEFB109BQ30KR1 87 aa3.1□□□□□ -1.91
APP-207ENST00000415997 CFAP221Q4G0U5 840 aa3.1□□□□□ -1.91
APP-207ENST00000415997 ATP1A1-AS1Q5TC04 95 aa3.1□□□□□ -1.91
APP-207ENST00000415997 TMEM215Q68D42 235 aa3.1□□□□□ -1.91
APP-207ENST00000415997 NAPEPLDQ6IQ20 393 aa3.1□□□□□ -1.91
APP-207ENST00000415997 JMJD6Q6NYC1 403 aaPredicted RBP3.1□□□□□ -1.91
APP-207ENST00000415997 CRTC1Q6UUV9 634 aa3.1□□□□□ -1.91
APP-207ENST00000415997 TMTC3Q6ZXV5 915 aa3.1□□□□□ -1.91
APP-207ENST00000415997 DSG4Q86SJ6 1040 aa3.1□□□□□ -1.91
APP-207ENST00000415997 DDX42Q86XP3 938 aaKnown RBP eCLIP3.1□□□□□ -1.91
APP-207ENST00000415997 APLFQ8IW19 511 aaPredicted RBP3.1□□□□□ -1.91
APP-207ENST00000415997 ZNF713Q8N859 430 aaPredicted RBP3.1□□□□□ -1.91
APP-207ENST00000415997 FSIP1Q8NA03 581 aa3.1□□□□□ -1.91
APP-207ENST00000415997 CHST14Q8NCH0 376 aa3.1□□□□□ -1.91
APP-207ENST00000415997 SIMC1Q8NDZ2 872 aa3.1□□□□□ -1.91
APP-207ENST00000415997 PIK3C3Q8NEB9 887 aa3.1□□□□□ -1.91
APP-207ENST00000415997 OR2T34Q8NGX1 318 aa3.1□□□□□ -1.91
APP-207ENST00000415997 EXOC6Q8TAG9 804 aa3.1□□□□□ -1.91
APP-207ENST00000415997 ITLN2Q8WWU7 325 aaPredicted RBP3.1□□□□□ -1.91
APP-207ENST00000415997 JPH3Q8WXH2 748 aaPredicted RBP3.1□□□□□ -1.91
APP-207ENST00000415997 WBP2Q969T9 261 aa3.1□□□□□ -1.91
APP-207ENST00000415997 FAM131CQ96AQ9 280 aa3.1□□□□□ -1.91
APP-207ENST00000415997 SNRNP40Q96DI7 357 aaKnown RBP3.1□□□□□ -1.91
APP-207ENST00000415997 SERAC1Q96JX3 654 aa3.1□□□□□ -1.91
APP-207ENST00000415997 HIST1H2AHQ96KK5 128 aa3.1□□□□□ -1.91
APP-207ENST00000415997 DNAJC7Q99615 494 aa3.1□□□□□ -1.91
APP-207ENST00000415997 HIST1H2AJQ99878 128 aa3.1□□□□□ -1.91
APP-207ENST00000415997 TREX2Q9BQ50 279 aaPredicted RBP3.1□□□□□ -1.91
APP-207ENST00000415997 ADPGKQ9BRR6 497 aa3.1□□□□□ -1.91
APP-207ENST00000415997 SOX7Q9BT81 388 aa3.1□□□□□ -1.91
APP-207ENST00000415997 TTLL2Q9BWV7 592 aa3.1□□□□□ -1.91
APP-207ENST00000415997 CCSER1Q9C0I3 900 aa3.1□□□□□ -1.91
APP-207ENST00000415997 CDT1Q9H211 546 aa3.1□□□□□ -1.91
APP-207ENST00000415997 ZBTB40Q9NUA8 1239 aa3.1□□□□□ -1.91
APP-207ENST00000415997 BARHL2Q9NY43 387 aa3.1□□□□□ -1.91
APP-207ENST00000415997 RRN3Q9NYV6 651 aa3.1□□□□□ -1.91
APP-207ENST00000415997 COPG2Q9UBF2 871 aa3.1□□□□□ -1.91
APP-207ENST00000415997 TLK1Q9UKI8 766 aa3.1□□□□□ -1.91
APP-207ENST00000415997 HRNRQ86YZ3 2850 aaPredicted RBP3.1□□□□□ -1.91
APP-207ENST00000415997 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.1□□□□□ -1.91
APP-207ENST00000415997 CPED1A4D0V7 1026 aa3.09□□□□□ -1.91
APP-207ENST00000415997 SERINC4A6NH21 518 aa3.09□□□□□ -1.91
APP-207ENST00000415997 NEDD8-MDP1E9PL57 170 aa3.09□□□□□ -1.91
APP-207ENST00000415997 IFIT3O14879 490 aaKnown RBP3.09□□□□□ -1.91
APP-207ENST00000415997 ZNF185O15231 689 aa3.09□□□□□ -1.91
APP-207ENST00000415997 KRT86O43790 486 aa3.09□□□□□ -1.91
APP-207ENST00000415997 MAGEC1O60732 1142 aa3.09□□□□□ -1.91
APP-207ENST00000415997 RFPL1O75677 317 aa3.09□□□□□ -1.91
APP-207ENST00000415997 NEBLO76041 1014 aa3.09□□□□□ -1.91
APP-207ENST00000415997 LYPLA2O95372 231 aa3.09□□□□□ -1.91
APP-207ENST00000415997 JMJD7P0C870 316 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PRKAR1AP10644 381 aa3.09□□□□□ -1.91
APP-207ENST00000415997 ITGAMP11215 1152 aa3.09□□□□□ -1.91
APP-207ENST00000415997 ODC1P11926 461 aa3.09□□□□□ -1.91
APP-207ENST00000415997 CYP3A5P20815 502 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PAX3P23760 479 aa3.09□□□□□ -1.91
APP-207ENST00000415997 CYP2F1P24903 491 aa3.09□□□□□ -1.91
APP-207ENST00000415997 HTR1EP28566 365 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PPP3CCP48454 512 aa3.09□□□□□ -1.91
APP-207ENST00000415997 GZMKP49863 264 aa3.09□□□□□ -1.91
APP-207ENST00000415997 MECP2P51608 486 aaKnown RBP3.09□□□□□ -1.91
APP-207ENST00000415997 IST1P53990 364 aa3.09□□□□□ -1.91
APP-207ENST00000415997 NAPAP54920 295 aa3.09□□□□□ -1.91
APP-207ENST00000415997 CDH8P55286 799 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PER3P56645 1201 aa3.09□□□□□ -1.91
APP-207ENST00000415997 DUSP2Q05923 314 aa3.09□□□□□ -1.91
APP-207ENST00000415997 RUNX1T1Q06455 604 aa3.09□□□□□ -1.91
APP-207ENST00000415997 FGL2Q14314 439 aa3.09□□□□□ -1.91
APP-207ENST00000415997 EPHA7Q15375 998 aa3.09□□□□□ -1.91
APP-207ENST00000415997 ANO4Q32M45 955 aa3.09□□□□□ -1.91
APP-207ENST00000415997 BEAN1Q3B7T3 259 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PDCD4Q53EL6 469 aaKnown RBP3.09□□□□□ -1.91
APP-207ENST00000415997 SLC45A4Q5BKX6 768 aa3.09□□□□□ -1.91
APP-207ENST00000415997 XKR9Q5GH70 373 aa3.09□□□□□ -1.91
APP-207ENST00000415997 ZC3H12BQ5HYM0 836 aaKnown RBP3.09□□□□□ -1.91
APP-207ENST00000415997 DCAF10Q5QP82 559 aa3.09□□□□□ -1.91
APP-207ENST00000415997 ZNF517Q6ZMY9 492 aaPredicted RBP3.09□□□□□ -1.91
APP-207ENST00000415997 PHYKPLQ8IUZ5 450 aa3.09□□□□□ -1.91
APP-207ENST00000415997 AHI1Q8N157 1196 aa3.09□□□□□ -1.91
APP-207ENST00000415997 ZNF548Q8NEK5 533 aaPredicted RBP3.09□□□□□ -1.91
APP-207ENST00000415997 CTCFLQ8NI51 663 aaPredicted RBP3.09□□□□□ -1.91
APP-207ENST00000415997 ASB10Q8WXI3 467 aa3.09□□□□□ -1.91
APP-207ENST00000415997 NDRG1Q92597 394 aaKnown RBP3.09□□□□□ -1.91
APP-207ENST00000415997 EVI5LQ96CN4 794 aa3.09□□□□□ -1.91
APP-207ENST00000415997 CCDC136Q96JN2 1154 aa3.09□□□□□ -1.91
APP-207ENST00000415997 SPATA17Q96L03 361 aa3.09□□□□□ -1.91
APP-207ENST00000415997 SENP8Q96LD8 212 aa3.09□□□□□ -1.91
APP-207ENST00000415997 CEP295NLQ96MC4 621 aa3.09□□□□□ -1.91
APP-207ENST00000415997 XPO6Q96QU8 1125 aaKnown RBP3.09□□□□□ -1.91
APP-207ENST00000415997 CCDC3Q9BQI4 270 aa3.09□□□□□ -1.91
APP-207ENST00000415997 LXNQ9BS40 222 aa3.09□□□□□ -1.91
APP-207ENST00000415997 CCDC94Q9BW85 323 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms