RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PQLC2Q6ZP29 291 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 DPPA4Q7L190 304 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 MINDY1Q8N5J2 469 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 NKAIN3Q8N8D7 197 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 TEX45Q8NA69 505 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 ENGASEQ8NFI3 743 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 OR6J1Q8NGC5 347 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 SECISBP2LQ93073 1101 aaKnown RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 LRRC59Q96AG4 307 aaKnown RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 VPS33AQ96AX1 596 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 PTERQ96BW5 349 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 ZNF653Q96CK0 615 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 MSI2Q96DH6 328 aaKnown RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 SPATA17Q96L03 361 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 NUDCD1Q96RS6 583 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 ACOX2Q99424 681 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 SCAND2PQ9GZW5 306 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 ALDH8A1Q9H2A2 487 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 PIGMQ9H3S5 423 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 TASP1Q9H6P5 420 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 HINT3Q9NQE9 182 aaKnown RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 WDR35Q9P2L0 1181 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 COPG2Q9UBF2 871 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 CLIC4Q9Y696 253 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 STON1Q9Y6Q2 735 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 LOC100509620A0A075B734 347 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 URADA6NGE7 173 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 MDM4O15151 490 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 TLX3O43711 291 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 TBCAO75347 108 aaKnown RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 FTCDO95954 541 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 BCL10O95999 233 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 MYBL1P10243 752 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 G6PDP11413 515 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 CPT2P23786 658 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 MATR3P43243 847 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 P2RX3P56373 397 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 MRPS34P82930 218 aaKnown RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 MTX1Q13505 466 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 GRAPQ13588 217 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 BAATQ14032 418 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 EIF2S3LQ2VIR3 472 aaKnown RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 LETM2Q2VYF4 491 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 TCP11X2Q5H9J9 407 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 NUGGCQ68CJ6 796 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 ANKRD54Q6NXT1 300 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 GALNTL5Q7Z4T8 443 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 SDCCAG8Q86SQ7 713 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 GGNQ86UU5 652 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 ARID3BQ8IVW6 561 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 HACE1Q8IYU2 909 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 SPATA6LQ8N4H0 392 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 TDRD5Q8NAT2 981 aaKnown RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 AGBL3Q8NEM8 1001 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 PRSS3P2Q8NHM4 247 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 RMDN1Q96DB5 314 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 CHFRQ96EP1 664 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 DGAT2Q96PD7 388 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 MRPL1Q9BYD6 325 aaKnown RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 PCED1AQ9H1Q7 454 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 MKKSQ9NPJ1 570 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 DECR2Q9NUI1 292 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 MTMR10Q9NXD2 777 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 PSD3Q9NYI0 1048 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 C5AR2Q9P296 337 aa4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P31-201ENST00000413333 ARHGEF40Q8TER5 1519 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 NCANO14594 1321 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 LOC102723996A0A087X1L8 192 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 WIPF3A6NGB9 483 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 A8MXE2 369 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 ATG13O75143 517 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 KLKB1P03952 638 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 CD58P19256 250 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 ACADLP28330 430 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 EIF2S3P41091 472 aaKnown RBP4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 MSH2P43246 934 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 METAP2P50579 478 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 RAD23AP54725 363 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 TGFB2P61812 414 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 PPARDQ03181 441 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 MYBPC2Q14324 1141 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 DUSP6Q16828 381 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 PNLIPRP3Q17RR3 467 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 Q4G0T1 1027 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 PLEKHA7Q6IQ23 1121 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 KRT80Q6KB66 452 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 IL27RAQ6UWB1 636 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 DEF8Q6ZN54 512 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 MTSS1LQ765P7 747 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 MON1BQ7L1V2 547 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 SLFN11Q7Z7L1 901 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 PATL1Q86TB9 770 aaKnown RBP4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 GALNT13Q8IUC8 556 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 Q8NFD4 153 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 GSDMBQ8TAX9 411 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 BICD2Q8TD16 824 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 DUSP19Q8WTR2 217 aa4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 ZNF622Q969S3 477 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB3P31-201ENST00000413333 ZFYVE19Q96K21 471 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms