RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 FZD9O00144 591 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 TRIM13O60858 407 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 YBX3P16989 372 aaKnown RBP eCLIP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 NPR3P17342 541 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 PKLRP30613 574 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 GRK4P32298 578 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 SLC18A2Q05940 514 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 SCN1BQ07699 218 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 MOGSQ13724 837 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 FAM91A1Q658Y4 838 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF517Q6ZMY9 492 aaPredicted RBP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 IRF2BP1Q8IU81 584 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 REM2Q8IYK8 340 aaPredicted RBP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 FAM71AQ8IYT1 594 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 FAM162AQ96A26 154 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 C12orf42Q96LP6 360 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 MIPEPQ99797 713 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 TUBA1CQ9BQE3 449 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 GTPBP2Q9BX10 602 aaKnown RBP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 SPAG4Q9NPE6 437 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 NMRK2Q9NPI5 230 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 GRHL1Q9NZI5 618 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 COL20A1Q9P218 1284 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 PCDH10Q9P2E7 1040 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 CDH9Q9ULB4 789 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 COL1A2P08123 1366 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 MYO1GB0I1T2 1018 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 VILLO15195 856 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 FOXD2O60548 495 aaPredicted RBP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 TSPAN3O60637 253 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 AVILO75366 819 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 VPS26AO75436 327 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 SOAT2O75908 522 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 PRKAR1AP10644 381 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 RPL9P32969 192 aaKnown RBP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 NOS2P35228 1153 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 IL18R1Q13478 541 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 THAP5Q7Z6K1 395 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF467Q7Z7K2 595 aaPredicted RBP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 OR8K3Q8NH51 312 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 WNT8BQ93098 351 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 SLC35B4Q969S0 331 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 RCN3Q96D15 328 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 DHX33Q9H6R0 707 aaKnown RBP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 ACSS3Q9H6R3 686 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 CHST7Q9NS84 486 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 MARCH2Q9P0N8 246 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 EBF1Q9UH73 591 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 NRXN3Q9Y4C0 1643 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 F8VP50 259 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 SYNCRIPO60506 623 aaKnown RBP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 DNAJA2O60884 412 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 GM2AP17900 193 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 SOX11P35716 441 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 SF3B4Q15427 424 aaKnown RBP eCLIP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 DDR2Q16832 855 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 ARHGAP17Q68EM7 881 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 FOXR2Q6PJQ5 311 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 ZDHHC24Q6UX98 284 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 STRA8Q7Z7C7 330 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 AMIGO3Q86WK7 504 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 CLEC4DQ8WXI8 215 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 NSMCE2Q96MF7 247 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 GANQ9H2C0 597 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 MRPL17Q9NRX2 175 aaKnown RBP8.51□□□□□ -1.05
PBRM1-209ENST00000412587 ABCC13Q9NSE7 274 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 TBC1D13Q9NVG8 400 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 ACTR3BQ9P1U1 418 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 OGDHLQ9ULD0 1010 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 CASZ1Q86V15 1759 aa8.51□□□□□ -1.05
PBRM1-209ENST00000412587 A0A0B4J269 797 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 A0A0G2JLL6 359 aaPredicted RBP8.5□□□□□ -1.05
PBRM1-209ENST00000412587 DHRS12A0PJE2 317 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 KCNK1O00180 336 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 UBDO15205 165 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 NDUFS2O75306 463 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 IL7P13232 177 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 DARSP14868 501 aaKnown RBP8.5□□□□□ -1.05
PBRM1-209ENST00000412587 POLR2CP19387 275 aaPredicted RBP8.5□□□□□ -1.05
PBRM1-209ENST00000412587 ARL4DP49703 201 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 KLF10Q13118 480 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 BMPR2Q13873 1038 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 EFR3AQ14156 821 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 PLEKHG6Q3KR16 790 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 PRRT2Q7Z6L0 340 aaPredicted RBP8.5□□□□□ -1.05
PBRM1-209ENST00000412587 PIGZQ86VD9 579 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 ZC3H7AQ8IWR0 971 aaKnown RBP8.5□□□□□ -1.05
PBRM1-209ENST00000412587 LGI2Q8N0V4 545 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 PGAM4Q8N0Y7 254 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 PCDH20Q8N6Y1 951 aaKnown RBP8.5□□□□□ -1.05
PBRM1-209ENST00000412587 CCDC185Q8N715 623 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 PACRGLQ8N7B6 248 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 LRRC52Q8N7C0 313 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 B3GALNT2Q8NCR0 500 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 HTR3CQ8WXA8 447 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 MBOAT7Q96N66 472 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 PHOX2BQ99453 314 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 SEPHS2Q99611 448 aa8.5□□□□□ -1.05
PBRM1-209ENST00000412587 TKTL2Q9H0I9 626 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms