RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 OXR1Q8N573 874 aa23.82■■□□□ 1.4
UBE2E3-202ENST00000410062 GLIS1Q8NBF1 620 aa23.82■■□□□ 1.4
UBE2E3-202ENST00000410062 EID2BQ96D98 161 aa23.82■■□□□ 1.4
UBE2E3-202ENST00000410062 AP1M1Q9BXS5 423 aa23.82■■□□□ 1.4
UBE2E3-202ENST00000410062 ABCG8Q9H221 673 aa23.82■■□□□ 1.4
UBE2E3-202ENST00000410062 ZFYVE1Q9HBF4 777 aa23.82■■□□□ 1.4
UBE2E3-202ENST00000410062 KCND1Q9NSA2 647 aa23.82■■□□□ 1.4
UBE2E3-202ENST00000410062 GOLGA6AQ9NYA3 693 aa23.82■■□□□ 1.4
UBE2E3-202ENST00000410062 DCDC2BA2VCK2 349 aa23.81■■□□□ 1.4
UBE2E3-202ENST00000410062 PGRMC1O00264 195 aaKnown RBP23.81■■□□□ 1.4
UBE2E3-202ENST00000410062 HLA-DPA1P20036 260 aa23.81■■□□□ 1.4
UBE2E3-202ENST00000410062 ADRA1AP35348 466 aa23.81■■□□□ 1.4
UBE2E3-202ENST00000410062 SLC14A1Q13336 389 aa23.81■■□□□ 1.4
UBE2E3-202ENST00000410062 CCHCR1Q8TD31 782 aa23.81■■□□□ 1.4
UBE2E3-202ENST00000410062 SCAMP4Q969E2 229 aa23.81■■□□□ 1.4
UBE2E3-202ENST00000410062 PPP1R2P1Q96PQ5 205 aa23.81■■□□□ 1.4
UBE2E3-202ENST00000410062 KCTD5Q9NXV2 234 aa23.81■■□□□ 1.4
UBE2E3-202ENST00000410062 DRG1Q9Y295 367 aaKnown RBP23.81■■□□□ 1.4
UBE2E3-202ENST00000410062 TOR1BO14657 336 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 AURKAO14965 403 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 USP12O75317 370 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 RXRGP48443 463 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 BNIP3Q12983 259 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 KCTD19Q17RG1 926 aaPredicted RBP23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 RANBP10Q6VN20 620 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 GATAD2AQ86YP4 633 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 CCDC89Q8N998 374 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 FUBP1Q96AE4 644 aaKnown RBP23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 AP2M1Q96CW1 435 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 NAPGQ99747 312 aaPredicted RBP23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 GPR63Q9BZJ6 419 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 HOMER3Q9NSC5 361 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 DNAJC28Q9NX36 388 aa23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 TDRD6O60522 2096 aaKnown RBP23.8■■□□□ 1.4
UBE2E3-202ENST00000410062 CES2O00748 559 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 SDC3O75056 442 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 FGF1P05230 155 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 ZSCAN5DPP0CG00 497 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 SPINT3P49223 89 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 PTK2BQ14289 1009 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 PUM1Q14671 1186 aaKnown RBP eCLIP23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 RAET1GQ6H3X3 334 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 TMC3Q7Z5M5 1100 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 PARGQ86W56 976 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 KLHDC8BQ8IXV7 354 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 ACTRT1Q8TDG2 376 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 BLOC1S5Q8TDH9 187 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 NAP1L3Q99457 506 aaPredicted RBP23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 PKD2L2Q9NZM6 624 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 KLF15Q9UIH9 416 aa23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 PNMA8BQ9ULN7 279 aaPredicted RBP23.79■■□□□ 1.4
UBE2E3-202ENST00000410062 FANCGO15287 622 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 SH3BP5O60239 455 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 TCP1P17987 556 aaKnown RBP23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 EPHA8P29322 1005 aaPredicted RBP23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 ACTN2P35609 894 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 TRIM23P36406 574 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 DPTQ07507 201 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 EIF2B5Q13144 721 aaKnown RBP23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 NFATC4Q14934 902 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 KCTD11Q693B1 232 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 MACC1Q6ZN28 852 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 NYAP1Q6ZVC0 841 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 GSTA5Q7RTV2 222 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 NRSN1Q8IZ57 195 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 PDCD7Q8N8D1 485 aaKnown RBP23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 CAMK1GQ96NX5 476 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 AGAP2Q99490 1192 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 TBL1YQ9BQ87 522 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 RIOK2Q9BVS4 552 aaKnown RBP23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 LGR4Q9BXB1 951 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 WDR26Q9H7D7 661 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 PCDHGB2Q9Y5G2 931 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 PCDHGA12O60330 932 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 TSHRP16473 764 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 SUZ12Q15022 739 aaKnown RBP23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 PAPD7Q5XG87 772 aaKnown RBP23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 ENPP7Q6UWV6 458 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 ZNF765Q7L2R6 523 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 HEATR4Q86WZ0 1026 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 SAP25Q8TEE9 199 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 SETD7Q8WTS6 366 aaKnown RBP23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 SRPK1Q96SB4 655 aaKnown RBP23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 ETNK1Q9HBU6 452 aa23.78■■□□□ 1.4
UBE2E3-202ENST00000410062 CTAGE9A4FU28 777 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 YKT6O15498 198 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 SOD1P00441 154 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 HTR1BP28222 390 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 GPR1P46091 355 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 TTC27Q6P3X3 843 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 DBX2Q6ZNG2 339 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 PIP4P1Q86T03 277 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 NAXDQ8IW45 347 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 RAVER1Q8IY67 606 aaKnown RBP23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 DEFB124Q8NES8 71 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 MAGOHBQ96A72 148 aaKnown RBP23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 BTBD3Q9Y2F9 522 aa23.77■■□□□ 1.4
UBE2E3-202ENST00000410062 CACNB4O00305 520 aaPredicted RBP23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 CSF2P04141 144 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 RPL22P35268 128 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms