RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TGIF1Q15583 401 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 PPP6R3Q5H9R7 873 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 SPECC1LQ69YQ0 1117 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 CLEC18BQ6UXF7 455 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 USP53Q70EK8 1073 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 SPRED1Q7Z699 444 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 SFTPA2Q8IWL1 248 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 LZTR1Q8N653 840 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 NPWQ8N729 165 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 CLEC18CQ8NCF0 446 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 CCL4L1Q8NHW4 92 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 SGF29Q96ES7 293 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 COQ10AQ96MF6 247 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 NSMCE3Q96MG7 304 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 ZNF599Q96NL3 588 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 PSKH2Q96QS6 385 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 PEBP4Q96S96 227 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 DPEP2Q9H4A9 486 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 WDR26Q9H7D7 661 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 CWC15Q9P013 229 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 B4GALT6Q9UBX8 382 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 SEPT3Q9UH03 358 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 MOSPD1Q9UJG1 213 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 MYO6Q9UM54 1294 aa9.18□□□□□ -0.94
NIF3L1-203ENST00000409129 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 A0A1W2PQ67 120 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 PRSS38A1L453 326 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 TTC24A2A3L6 582 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 ENO4A6NNW6 628 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 B4DGG1 531 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 AGRPO00253 132 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 B4GAT1O43505 415 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 FTLP02792 175 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 LIPCP11150 499 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 MYCLP1P12525 358 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 ATP1A3P13637 1013 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 CCNB1P14635 433 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 ITIH1P19827 911 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 ETV5P41161 510 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 B4GALNT1Q00973 533 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 SLC10A7Q0GE19 358 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 NCAPHQ15003 741 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 STX1AQ16623 288 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 SKIDA1Q1XH10 827 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 TMCO4Q5TGY1 634 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 XKR5Q6UX68 686 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 CYP4V2Q6ZWL3 525 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 TMPRSS9Q7Z410 1059 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 PIM3Q86V86 326 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 PTRH1Q86Y79 214 aaKnown RBP9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 NRROSQ86YC3 692 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 SLITRK4Q8IW52 837 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 TP53INP2Q8IXH6 220 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 PELI3Q8N2H9 469 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 CBARPQ8N350 705 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 KIAA1524Q8TCG1 905 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 GPBAR1Q8TDU6 330 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 FNIP1Q8TF40 1166 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 USP7Q93009 1102 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 CMKLR1Q99788 373 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 ARHGAP9Q9BRR9 750 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 TEX101Q9BY14 249 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 TRIM7Q9C029 511 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 EPN3Q9H201 632 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 HSD3B7Q9H2F3 369 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 SPATS2LQ9NUQ6 558 aaKnown RBP9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 KCTD5Q9NXV2 234 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 PLA2G2EQ9NZK7 142 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 SEPT10Q9P0V9 454 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 PCDHGC4Q9Y5F7 938 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 SDK2Q58EX2 2172 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 CELSR2Q9HCU4 2923 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 LRP4O75096 1905 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 CSMD1Q96PZ7 3565 aa9.17□□□□□ -0.94
NIF3L1-203ENST00000409129 PRAMEF33A0A0G2JMD5 474 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 PRAMEF10O60809 474 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 SOCS5O75159 536 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 LRCH4O75427 683 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 HEXIM1O94992 359 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 FUCA1P04066 466 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 ITGB2P05107 769 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 FGF1P05230 155 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 CEACAM5P06731 702 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 GZMAP12544 262 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 VIPR1P32241 457 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 HSPA9P38646 679 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 MAPK10P53779 464 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 OR1D5P58170 312 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 ILF3Q12906 894 aaKnown RBP eCLIP9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 DPYSQ14117 519 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 CNGA3Q16281 694 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 AMZ1Q400G9 498 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 MANEAQ5SRI9 462 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 PHF19Q5T6S3 580 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 ZNF438Q7Z4V0 828 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 C17orf82Q86X59 251 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 ZFAND4Q86XD8 727 aa9.16□□□□□ -0.94
NIF3L1-203ENST00000409129 ZDHHC1Q8WTX9 485 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms