RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 NAE1Q13564 534 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 C1orf141Q5JVX7 400 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 STRIP1Q5VSL9 837 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 ADALQ6DHV7 355 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 DEF8Q6ZN54 512 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 CFAP77Q6ZQR2 320 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 CHST3Q7LGC8 479 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 CCDC186Q7Z3E2 898 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 KBTBD6Q86V97 674 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 LINC00346Q8IVM7 164 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 ARID3BQ8IVW6 561 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 FAM217AQ8IXS0 508 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 RBFAQ8N0V3 343 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 MINDY1Q8N5J2 469 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 PARP16Q8N5Y8 322 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 ZBTB2Q8N680 514 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 IL17RCQ8NAC3 791 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 TMEM163Q8TC26 289 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 NUDCD1Q96RS6 583 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 KLHL4Q9C0H6 718 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 THSD1Q9NS62 852 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 UBA2Q9UBT2 640 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 PLEKHB1Q9UF11 243 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 FBXW11Q9UKB1 542 aa4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 PTRH2Q9Y3E5 179 aaKnown RBP4.86□□□□□ -1.63
HMGB3P18-201ENST00000406327 TRBV5-3A0A0A0MS03 114 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 A8MXE2 369 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 OGG1O15527 345 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 HSPA4LO95757 839 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 IGLV2-14P01704 120 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 CTSAP10619 480 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 PROZP22891 400 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 HOXC9P31274 260 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 DCTDP32321 178 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 CTNNA1P35221 906 aaKnown RBP4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 AVPR1AP37288 418 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 MSH2P43246 934 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 ARSEP51690 589 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 CDH12P55289 794 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 TAS2R40P59535 323 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 PSMC6P62333 389 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 KRT83P78385 493 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 GAD2Q05329 585 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 CAPSQ13938 189 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 KCNC3Q14003 757 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 LPIN1Q14693 890 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 ZNF362Q5T0B9 420 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 HECTD3Q5T447 861 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 PLEKHA7Q6IQ23 1121 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 CACNA2D4Q7Z3S7 1137 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 SLFN11Q7Z7L1 901 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 LDLRAD3Q86YD5 345 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 SLC35F5Q8WV83 523 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 TMEM18Q96B42 140 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 MSI2Q96DH6 328 aaKnown RBP4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 PGAP3Q96FM1 320 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 ABHD1Q96SE0 405 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 ADPGKQ9BRR6 497 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 C1QTNF5Q9BXJ0 243 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 LHPPQ9H008 270 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 NDST4Q9H3R1 872 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 AAMDCQ9H7C9 122 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 SLC28A3Q9HAS3 691 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 LTB4R2Q9NPC1 389 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 BTBD3Q9Y2F9 522 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 CCL27Q9Y4X3 112 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 TRPV2Q9Y5S1 764 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 KIF15Q9NS87 1388 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 UHRF1BP1LA0JNW5 1464 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 TEX14Q8IWB6 1497 aa4.85□□□□□ -1.63
HMGB3P18-201ENST00000406327 PLCH2O75038 1416 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 SPATA31E1Q6ZUB1 1445 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 TCRBV21S2A2A0A5A6 115 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 TMEM202A6NGA9 273 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 CHL1O00533 1208 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 KLK8O60259 260 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 GGPS1O95749 300 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 KLKB1P03952 638 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 CBSLP0DN79 551 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 C6P13671 934 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 CBSP35520 551 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 MATR3P43243 847 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 TERF1P54274 439 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 TFF2Q03403 129 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 ST3GAL1Q11201 340 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 NEDD9Q14511 834 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 SOWAHAQ2M3V2 549 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 SMTNL2Q2TAL5 461 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 SGO1Q5FBB7 561 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 PIK3CD-AS1Q5SR53 167 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 RARS2Q5T160 578 aaKnown RBP4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 METTL2BQ6P1Q9 378 aaKnown RBP4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 QSOX2Q6ZRP7 698 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 PALB2Q86YC2 1186 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 SLC35F3Q8IY50 421 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 CCDC13Q8IYE1 715 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 BOLLQ8N9W6 283 aaKnown RBP4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 CEP76Q8TAP6 659 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 DUSP19Q8WTR2 217 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 ZNF622Q969S3 477 aaKnown RBP eCLIP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms