RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 INTS10Q9NVR2 710 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 TRPM5Q9NZQ8 1165 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 AFF4Q9UHB7 1163 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 AGO1Q9UL18 857 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 ARIH1Q9Y4X5 557 aaPredicted RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 H3BMM5 538 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 STX16-NPEPL1H3BU86 382 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 XRCC1P18887 633 aaPredicted RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 MSX2P35548 267 aaPredicted RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 CDH13P55290 713 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 CCL23P55773 120 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 TAF1AQ15573 450 aaPredicted RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 LRRC36Q1X8D7 754 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 CYHR1Q6ZMK1 362 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 PTGR2Q8N8N7 351 aaPredicted RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 WBP2Q969T9 261 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 CLSTN3Q9BQT9 956 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 A0A1B0GVM2 712 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 UBA6A0AVT1 1052 aaPredicted RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 DPPA5A6NC42 116 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 UBXN8O00124 270 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 GPC4O75487 556 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 IRF1P10914 325 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 MTHFD2P13995 350 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 SQLEQ14534 574 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 ADGRF1Q5T601 910 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 CAPRIN2Q6IMN6 1127 aaKnown RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 KIAA1841Q6NSI8 718 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 CHST9Q7L1S5 443 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 C16orf59Q7L2K0 433 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 RNF168Q8IYW5 571 aaPredicted RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 RHEBL1Q8TAI7 183 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 GATA6Q92908 595 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 TMA16Q96EY4 203 aaKnown RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 TFB2MQ9H5Q4 396 aaKnown RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 CWH43Q9H720 699 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 TBC1D30Q9Y2I9 924 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 PCDHGC4Q9Y5F7 938 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 PSMD12O00232 456 aaPredicted RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 SIX3O95343 332 aaPredicted RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 F11P03951 625 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 FMO4P31512 558 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 SH3BP2P78314 561 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 MS4A2Q01362 244 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 UGT3A2Q3SY77 523 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 SETMARQ53H47 684 aaPredicted RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 RNF219Q5W0B1 726 aaPredicted RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 AFTPHQ6ULP2 937 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 FAM43BQ6ZT52 329 aaPredicted RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 RNF148Q8N7C7 305 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 ZNF461Q8TAF7 563 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 GDPD5Q8WTR4 605 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 LPGAT1Q92604 370 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 IGSF21Q96ID5 467 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 MYRFLQ96LU7 910 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 ATOH8Q96SQ7 321 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 ZBED2Q9BTP6 218 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 MRPL1Q9BYD6 325 aaKnown RBP16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 TRPC7Q9HCX4 862 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 MRGBPQ9NV56 204 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 MED16Q9Y2X0 877 aa16.92■□□□□ 0.3
DNMT3A-205ENST00000402667 C2orf78A6NCI8 922 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 C2orf81A6NN90 581 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 KIF3CO14782 793 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 RHOBTB1O94844 696 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 ME2P23368 584 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 PSMA3P25788 255 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 PEX2P28328 305 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 FLOT2Q14254 428 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 FASTKQ14296 549 aaKnown RBP16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 PFKFB4Q16877 469 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 SFT2D3Q587I9 215 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 CXorf57Q6NSI4 855 aaKnown RBP16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 PAQR3Q6TCH7 311 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 LARP4Q71RC2 724 aaKnown RBP eCLIP16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 PDSS2Q86YH6 399 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 CLYBLQ8N0X4 340 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 LPCAT1Q8NF37 534 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 KLF16Q9BXK1 252 aaPredicted RBP16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 KLHL4Q9C0H6 718 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 UTP6Q9NYH9 597 aaKnown RBP16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 SUFUQ9UMX1 484 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 FAM50BQ9Y247 325 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 RAI2Q9Y5P3 530 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 ATP6AP2A0A1C7CYW4 349 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 LRRC14BA6NHZ5 514 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 PPP6CO00743 305 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 ATP6AP2O75787 350 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 ABLIM3O94929 683 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 MT-CO1P00395 513 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 CXCL10P02778 98 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 CES1P23141 567 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 ARF5P84085 180 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 STX5Q13190 355 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 PTK2BQ14289 1009 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 TRIP10Q15642 601 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 GSTA3Q16772 222 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 AGKQ53H12 422 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 RAB44Q7Z6P3 723 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms