RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 NAB1Q13506 487 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 PEX6Q13608 980 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 PLEKHG4Q58EX7 1191 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 MTX3Q5HYI7 312 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 NANOGNBQ7Z5D8 188 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 CAPNS2Q96L46 248 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 SLC38A2Q96QD8 506 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 ING3Q9NXR8 418 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 NKIRAS2Q9NYR9 191 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 MSCO60682 206 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 C1RP00736 705 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 CARTPTQ16568 116 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 SAMD4BQ5PRF9 694 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.76□□□□□ -0.21
VAPA-202ENST00000400000 C1orf186Q6ZWK4 172 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 PAGE2Q7Z2X7 111 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 CPA6Q8N4T0 437 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 PHF24Q9UPV7 400 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 BTBD3Q9Y2F9 522 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 AK5Q9Y6K8 562 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 FADS2O95864 444 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 VIPP01282 170 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 ASGR1P07306 291 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 LPOP22079 712 aaPredicted RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 ERVK-21P61565 698 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 KRR1Q13601 381 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 GDF6Q6KF10 455 aaPredicted RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 SETD9Q8NE22 299 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 JOSD2Q8TAC2 188 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 RCN3Q96D15 328 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 DUS2Q9NX74 493 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 XPR1Q9UBH6 696 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 A0A1W2PPM1 405 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 CLCNKBP51801 687 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 ZNF143P52747 638 aaPredicted RBP13.75□□□□□ -0.21
VAPA-202ENST00000400000 C2orf27AQ580R0 203 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 CDKAL1Q5VV42 579 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 TRPV3Q8NET8 790 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 TTPALQ9BTX7 342 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 TPK1Q9H3S4 243 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 UBAP1Q9NZ09 502 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 COMMD9Q9P000 198 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 URADA6NGE7 173 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 BTN3A3O00478 584 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 MAGEC1O60732 1142 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 AOC2O75106 756 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 MMP3P08254 477 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 COX4I1P13073 169 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 HSPB3Q12988 150 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 EPS8L1Q8TE68 723 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 DPEP3Q9H4B8 488 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 CABYRO75952 493 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 C9P02748 559 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 SLC6A2P23975 617 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 GCNT1Q02742 428 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 SMARCD3Q6STE5 483 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 HID1Q8IV36 788 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 ZMIZ2Q8NF64 920 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 OR2L5Q8NG80 312 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 RNF157Q96PX1 679 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 CTPS2Q9NRF8 586 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 COPG2Q9UBF2 871 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 ASTN1O14525 1302 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 CXCR2P25025 360 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 TOP3AQ13472 1001 aaPredicted RBP13.75□□□□□ -0.21
VAPA-202ENST00000400000 CYP27C1Q4G0S4 372 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 CCNYL2Q5T2Q4 361 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 GPR107Q5VW38 600 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 SLC30A6Q6NXT4 461 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 JAZF1Q86VZ6 243 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 OR4K2Q8NGD2 314 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 ZFP28Q8NHY6 868 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 RACGAP1Q9H0H5 632 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 TNPO3Q9Y5L0 923 aaKnown RBP13.75□□□□□ -0.21
VAPA-202ENST00000400000 TIE1P35590 1138 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 ZNF460Q14592 562 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 IL17AQ16552 155 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 C9orf57Q5W0N0 161 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 DCLRE1AQ6PJP8 1040 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 STX12Q86Y82 276 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 UBE2J2Q8N2K1 259 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 PIH1D2Q8WWB5 315 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 UROC1Q96N76 676 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 SLC25A23Q9BV35 468 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 TLR10Q9BXR5 811 aa13.75□□□□□ -0.21
VAPA-202ENST00000400000 SLC15A5A6NIM6 579 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 SLC28A1O00337 649 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 LGR5O75473 907 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 CDH3P22223 829 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 FAM46CQ5VWP2 391 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 TAPT1Q6NXT6 567 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 OR5M3Q8NGP4 307 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 TSEN15Q8WW01 171 aaKnown RBP13.74□□□□□ -0.21
VAPA-202ENST00000400000 BAP1Q92560 729 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 PXDNQ92626 1479 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 TFECO14948 347 aaPredicted RBP13.74□□□□□ -0.21
VAPA-202ENST00000400000 FAM35AQ86V20 835 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 NKAPQ8N5F7 415 aaKnown RBP13.74□□□□□ -0.21
VAPA-202ENST00000400000 TRIM63Q969Q1 353 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 AGO3Q9H9G7 860 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms