RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 VIL1P09327 827 aaKnown RBP10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 OR4Q2P0C623 313 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 ZNF37AP17032 561 aaPredicted RBP10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 RPL6Q02878 288 aaKnown RBP10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 ECH1Q13011 328 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 FAM110CQ1W6H9 321 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 PYHIN1Q6K0P9 492 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 DGLUCYQ7Z3D6 616 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 SHC3Q92529 594 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 KCNJ9Q92806 393 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 RTFDC1Q9BY42 306 aaPredicted RBP10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 ASB7Q9H672 318 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 PCDHGB5Q9Y5G0 923 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 ZNF541Q9H0D2 1346 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 F8VP50 259 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 CPNE6O95741 557 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 UGT2B4P06133 528 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 TSPAN19P0C672 248 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 ANPEPP15144 967 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 SLC7A1P30825 629 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 SEPHS1P49903 392 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 RAB2AP61019 212 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 ATP13A5Q4VNC0 1218 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 PYDC2Q56P42 97 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 SHQ1Q6PI26 577 aaKnown RBP10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 POTEAQ6S8J7 498 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 CES3Q6UWW8 571 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 CHSY3Q70JA7 882 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 GKN2Q86XP6 184 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 TDRPQ86YL5 185 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 ARMC8Q8IUR7 673 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 DNASE1L2Q92874 299 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 RFT1Q96AA3 541 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 NDC1Q9BTX1 674 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 EHD4Q9H223 541 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 NKX2-4Q9H2Z4 354 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 CORO1CQ9ULV4 474 aaPredicted RBP10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 MGAT4AQ9UM21 535 aa10.97□□□□□ -0.65
CACNA1C-216ENST00000399638 CLDN5O00501 218 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 GPR139Q6DWJ6 353 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 C17orf64Q86WR6 236 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 ZNF280BQ86YH2 543 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 SPATA5L1Q9BVQ7 753 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 CMTM6Q9NX76 183 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 DISP2A7MBM2 1401 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 SLC33A1O00400 549 aaPredicted RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 MYL12BO14950 172 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 UBXN7O94888 489 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 CYP1A1P04798 512 aaPredicted RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 DRG2P55039 364 aaKnown RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 PPIDQ08752 370 aaKnown RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 PRKG2Q13237 762 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 ARID3BQ8IVW6 561 aaPredicted RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 LSM14AQ8ND56 463 aaKnown RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 MYO19Q96H55 970 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 ETAA1Q9NY74 926 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 RGS17Q9UGC6 210 aaPredicted RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 DMGDHQ9UI17 866 aaKnown RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 AGO1Q9UL18 857 aaKnown RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 PLSCR1O15162 318 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 FGF10O15520 208 aaPredicted RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 VAPBO95292 243 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 SLC29A2Q14542 456 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 SPOCD1Q6ZMY3 1216 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 ATG14Q6ZNE5 492 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 CASKIN2Q8WXE0 1202 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 TATDN2Q93075 761 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 RIBC2Q9H4K1 309 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 PLEKHA1Q9HB21 404 aa10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 MTO1Q9Y2Z2 717 aaKnown RBP10.96□□□□□ -0.65
CACNA1C-216ENST00000399638 PLOD2O00469 737 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 CYP17A1P05093 508 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 ATXN7L2Q5T6C5 722 aaPredicted RBP10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 FBXO36Q8NEA4 188 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 PRR11Q96HE9 360 aaPredicted RBP10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 GAL3ST1Q99999 423 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 CIDEBQ9UHD4 219 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 ITSN1Q15811 1721 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 WDR27A2RRH5 827 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 ZSCAN5BA6NJL1 495 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 TLX3O43711 291 aaPredicted RBP10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 NPR3P17342 541 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 DRD4P21917 467 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 HNRNPH3P31942 346 aaKnown RBP10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 TAS2R41P59536 307 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 PPP4CP60510 307 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 ACAP1Q15027 740 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 ANKS1BQ7Z6G8 1248 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 CCNJLQ8IV13 435 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 OR5M3Q8NGP4 307 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 NCSTNQ92542 709 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 DCLRE1BQ9H816 532 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 C3orf18Q9UK00 162 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 DKKL1Q9UK85 242 aa10.96□□□□□ -0.66
CACNA1C-216ENST00000399638 TM7SF2O76062 418 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 MGAT1P26572 445 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 SMCO1Q147U7 214 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 SWI5Q1ZZU3 235 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 CCNYL2Q5T2Q4 361 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms