RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 EID2BQ96D98 161 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PDXPQ96GD0 296 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 WDR92Q96MX6 357 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 LYSMD1Q96S90 227 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 VAT1Q99536 393 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 LRRC61Q9BV99 259 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SCNM1Q9BWG6 230 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ABCG8Q9H221 673 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 WDR26Q9H7D7 661 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 MRPL40Q9NQ50 206 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FAM153AQ9UHL3 310 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SHOC2Q9UQ13 582 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 APOBEC2Q9Y235 224 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 R3HDM2Q9Y2K5 976 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PPP2R2CQ9Y2T4 447 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CEP295Q9C0D2 2601 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CACNB4O00305 520 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 KCNN4O15554 427 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CELA2BP08218 269 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 HK3P52790 923 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SRP54P61011 504 aaKnown RBP14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 DEFB133Q30KQ1 61 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 MEI1Q5TIA1 1274 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 RAET1GQ6H3X3 334 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 KDELC1Q6UW63 502 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ZNF662Q6ZS27 426 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 LYSMD3Q7Z3D4 306 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 HEATR4Q86WZ0 1026 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 BTN2A2Q8WVV5 523 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 AP2M1Q96CW1 435 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 MRGPRX2Q96LB1 330 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 AGAP2Q99490 1192 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GORASP1Q9BQQ3 440 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SLC13A1Q9BZW2 595 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CLPBQ9H078 707 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 USP29Q9HBJ7 922 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FGF22Q9HCT0 170 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 KLQ9UEF7 1012 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TRHDEQ9UKU6 1024 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ANGPTL2Q9UKU9 493 aa14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 COL5A1P20908 1838 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB1-202ENST00000399079 NEMP2A6NFY4 417 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 NRDCO43847 1150 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 DKK1O94907 266 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 NDST3O95803 873 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SOD1P00441 154 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TSHRP16473 764 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CHRNA4P43681 627 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 WNT3AP56704 352 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 KIAA1024LP59773 190 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 DPTQ07507 201 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SLC14A2Q15849 920 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PROX2Q3B8N5 592 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ANKRD20A2Q5SQ80 823 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ANKRD20A1Q5TYW2 823 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ANKRD20A3Q5VUR7 823 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 RAB44Q7Z6P3 723 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CDKL3Q8IVW4 592 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 IPMKQ8NFU5 416 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 OR56A4Q8NGH8 313 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CCDC110Q8TBZ0 833 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ADAMTS14Q8WXS8 1223 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 OR1E3Q8WZA6 343 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FCRL5Q96RD9 977 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 RIOK2Q9BVS4 552 aaKnown RBP14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TEX101Q9BY14 249 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 KCTD5Q9NXV2 234 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 NLGN3Q9NZ94 848 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SPASTQ9UBP0 616 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 RSPH14Q9UHP6 348 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 KLK13Q9UKR3 277 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CHD8Q9HCK8 2581 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 AKAP13Q12802 2813 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 LOC285095A0A1B0GVY8 99 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GOLGA6L9A6NEM1 432 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 AURKAO14965 403 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TRIM16O95361 564 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SLC4A1P02730 911 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FUCA1P04066 466 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 HOXC4P09017 264 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 MYCLP1P12525 358 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CKMT2P17540 419 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GPR1P46091 355 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SPINT3P49223 89 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ACADVLP49748 655 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SHC2P98077 582 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CDK3Q00526 305 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 HS1BP3Q53T59 392 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 DHRS13Q6UX07 377 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SLC25A41Q8N5S1 370 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PTCD2Q8WV60 388 aaKnown RBP14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ATG4AQ8WYN0 398 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 APOLD1Q96LR9 279 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ALS2CR12Q96Q35 445 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 WDR24Q96S15 920 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GBA3Q9H227 469 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SUDS3Q9H7L9 328 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ZFYVE1Q9HBF4 777 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 MAGEE1Q9HCI5 957 aa14.05□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CYP4F12Q9HCS2 524 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms