RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TKTP29401 623 aaKnown RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 ALDH4A1P30038 563 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 SCNN1AP37088 669 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 ZNF484Q5JVG2 852 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 COLEC12Q5KU26 742 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 ANKRD26P1Q6NSI1 321 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 PSRC1Q6PGN9 363 aaPredicted RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 MCFD2Q8NI22 146 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 S100PBPQ96BU1 408 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 RNF208Q9H0X6 261 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 TBC1D17Q9HA65 648 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 MRPS33Q9Y291 106 aaKnown RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 DUOX2Q9NRD8 1548 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 ANXA2P2A6NMY6 339 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 GYPCP04921 128 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 PCCBP05166 539 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 ANXA2P07355 339 aaKnown RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 GSTT1P30711 240 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 ADAM17P78536 824 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 DEFB106AQ8N104 65 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 FAM84BQ96KN1 310 aaPredicted RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 C3orf14Q9HBI5 128 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 FKBP7Q9Y680 259 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 FAM228BP0C875 321 aa12.33□□□□□ -0.43
SMU1-201ENST00000397149 YAP1P46937 504 aaKnown RBP12.33□□□□□ -0.43
SMU1-201ENST00000397149 CYP27C1Q4G0S4 372 aa12.33□□□□□ -0.43
SMU1-201ENST00000397149 FAM83AQ86UY5 434 aa12.33□□□□□ -0.43
SMU1-201ENST00000397149 TMPRSS4Q9NRS4 437 aa12.33□□□□□ -0.43
SMU1-201ENST00000397149 KANSL3Q9P2N6 904 aa12.33□□□□□ -0.43
SMU1-201ENST00000397149 MTF2Q9Y483 593 aaPredicted RBP12.33□□□□□ -0.43
SMU1-201ENST00000397149 GSC2O15499 205 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SUV39H1O43463 412 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 MSX2P35548 267 aaPredicted RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 CBX2Q14781 532 aaPredicted RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 PAPD7Q5XG87 772 aaKnown RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 GPALPP1Q8IXQ4 340 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SP8Q8IXZ3 490 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SLC2A14Q8TDB8 520 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 CLPTM1LQ96KA5 538 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SERPINB11Q96P15 392 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 XPNPEP3Q9NQH7 507 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 POLR3HQ9Y535 204 aaPredicted RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 PER2O15055 1255 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 RGL2O15211 777 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ICAM3P32942 547 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SEMA3AQ14563 771 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SCGB2B2Q4G0G5 96 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 FAM151BQ6UXP7 276 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ARPINQ7Z6K5 226 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 FBXO33Q7Z6M2 555 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ZCCHC10Q8TBK6 192 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ARHGAP9Q9BRR9 750 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 TMEM27Q9HBJ8 222 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SEC14L3Q9UDX4 400 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ZNF221Q9UK13 617 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 MAP4K5Q9Y4K4 846 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ITPKAP23677 461 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SUN5Q8TC36 379 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SEMA3GQ9NS98 782 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ANKEF1Q9NU02 776 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 MARCH2Q9P0N8 246 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ABI3Q9P2A4 366 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 NDRG2Q9UN36 371 aaKnown RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 GPATCH8Q9UKJ3 1502 aaKnown RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 CACNB4O00305 520 aaPredicted RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 PDCD5O14737 125 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 LGR5O75473 907 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 GNRH1P01148 92 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 CDK9P50750 372 aaKnown RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 SCN1BQ07699 218 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SCGB2A2Q13296 93 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 TMPRSS11BQ86T26 416 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 HDDC3Q8N4P3 179 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 TNPO3Q9Y5L0 923 aaKnown RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 SLC26A4O43511 780 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SNRPB2P08579 225 aaKnown RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 HDCP19113 662 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 PTGS2P35354 604 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 RPL14P50914 215 aaKnown RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 ALDH5A1P51649 535 aaPredicted RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 LSM12Q3MHD2 195 aaKnown RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 BRMS1LQ5PSV4 323 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 C1orf94Q6P1W5 598 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 GALNT18Q6P9A2 607 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 METTL7BQ6UX53 244 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 OR52K1Q8NGK4 314 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 GPR152Q8TDT2 470 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 GTF3C2Q8WUA4 911 aaPredicted RBP12.33□□□□□ -0.44
SMU1-201ENST00000397149 SEMA4AQ9H3S1 761 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ALG2Q9H553 416 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 SGK2Q9HBY8 427 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 ALG5Q9Y673 324 aa12.33□□□□□ -0.44
SMU1-201ENST00000397149 GON4LQ3T8J9 2241 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 RAB39AQ14964 217 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 ZDHHC20Q5W0Z9 365 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 GPR139Q6DWJ6 353 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 STK40Q8N2I9 435 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 STAG3L4Q8TBR4 150 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 ZSCAN5DPP0CG00 497 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms