RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 B4GALNT1Q00973 533 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 DPTQ07507 201 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 TRA2AQ13595 282 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLTA-203ENST00000396603 ACOX1Q15067 660 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 PPP6R3Q5H9R7 873 aaPredicted RBP16.3■□□□□ 0.2
CLTA-203ENST00000396603 TMEM164Q5U3C3 297 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 KIAA1614Q5VZ46 1190 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 KCTD16Q68DU8 428 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 ALKBH5Q6P6C2 394 aaKnown RBP16.3■□□□□ 0.2
CLTA-203ENST00000396603 PIM3Q86V86 326 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 DTX1Q86Y01 620 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 DTD2Q96FN9 168 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 DPYSL5Q9BPU6 564 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 MGME1Q9BQP7 344 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 LGR4Q9BXB1 951 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 FRMD8Q9BZ67 464 aaPredicted RBP16.3■□□□□ 0.2
CLTA-203ENST00000396603 ISCUQ9H1K1 167 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 CYP4F12Q9HCS2 524 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 MRPL40Q9NQ50 206 aaKnown RBP16.3■□□□□ 0.2
CLTA-203ENST00000396603 CNOT8Q9UFF9 292 aaKnown RBP16.3■□□□□ 0.2
CLTA-203ENST00000396603 PISDQ9UG56 409 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 PPIL1Q9Y3C6 166 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 PCDHB11Q9Y5F2 797 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 FLNBO75369 2602 aaKnown RBP16.3■□□□□ 0.2
CLTA-203ENST00000396603 TENM4Q6N022 2769 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 B4DGG1 531 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 EFSO43281 561 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 PEX11BO96011 259 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 CPP00450 1065 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 PYGLP06737 847 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 KRT10P13645 584 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 SERPINB6P35237 376 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 CDH6P55285 790 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 SLC10A7Q0GE19 358 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 SQSTM1Q13501 440 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 CNGA3Q16281 694 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 SLC18A3Q16572 532 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 CCDC122Q5T0U0 273 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 TMCO3Q6UWJ1 677 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 ARHGAP36Q6ZRI8 547 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 USP53Q70EK8 1073 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 NLRP8Q86W28 1048 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 NDUFAF2Q8N183 169 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 ZSCAN1Q8NBB4 408 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 NSMCE1Q8WV22 266 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 ZNF653Q96CK0 615 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 SCRN2Q96FV2 425 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 MCCC1Q96RQ3 725 aaPredicted RBP16.29■□□□□ 0.2
CLTA-203ENST00000396603 CARS2Q9HA77 564 aaKnown RBP16.29■□□□□ 0.2
CLTA-203ENST00000396603 SLC17A4Q9Y2C5 497 aa16.29■□□□□ 0.2
CLTA-203ENST00000396603 GOLGA6L3A6NEY3 463 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 CEACAM5P06731 702 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 IVLP07476 585 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 HGFP14210 728 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 CDK3Q00526 305 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 MAP9Q49MG5 647 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 MANEAQ5SRI9 462 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 NYAP1Q6ZVC0 841 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 USP45Q70EL2 814 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 POLNQ7Z5Q5 900 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 HEATR4Q86WZ0 1026 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 Q8N9G6 341 aaPredicted RBP16.28■□□□□ 0.2
CLTA-203ENST00000396603 ZDHHC1Q8WTX9 485 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 TEKT4Q8WW24 435 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 SCARF2Q96GP6 870 aaPredicted RBP16.28■□□□□ 0.2
CLTA-203ENST00000396603 PANX2Q96RD6 677 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 SEMA3CQ99985 751 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 LUC7LQ9NQ29 371 aaKnown RBP16.28■□□□□ 0.2
CLTA-203ENST00000396603 RCOR3Q9P2K3 495 aaPredicted RBP16.28■□□□□ 0.2
CLTA-203ENST00000396603 DNPEPQ9ULA0 475 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 PCDHGA3Q9Y5H0 932 aa16.28■□□□□ 0.2
CLTA-203ENST00000396603 A0A087X0T9 212 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 PRAMEF33A0A0G2JMD5 474 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 RHPN2P1A8MT19 583 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 ATMINO43313 823 aaPredicted RBP16.27■□□□□ 0.2
CLTA-203ENST00000396603 MAFKO60675 156 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 PRAMEF10O60809 474 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 FGF1P05230 155 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 FAM228BP0C875 321 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 PIGHQ14442 188 aaPredicted RBP16.27■□□□□ 0.2
CLTA-203ENST00000396603 TCEA2Q15560 299 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 NRROSQ86YC3 692 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 CCDC170Q8IYT3 715 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 ATPAF2Q8N5M1 289 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 NIPA2Q8N8Q9 360 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 TC2NQ8N9U0 490 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 CCDC112Q8NEF3 446 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 CCL4L1Q8NHW4 92 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 CTNNBL1Q8WYA6 563 aaPredicted RBP16.27■□□□□ 0.2
CLTA-203ENST00000396603 NSMCE3Q96MG7 304 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 CDH19Q9H159 772 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.2
CLTA-203ENST00000396603 HAUS2Q9NVX0 235 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 TAAR2Q9P1P5 351 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 LCMT1Q9UIC8 334 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 MOSPD1Q9UJG1 213 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 PCDHGC4Q9Y5F7 938 aa16.27■□□□□ 0.2
CLTA-203ENST00000396603 SCN8AQ9UQD0 1980 aa16.26■□□□□ 0.19
CLTA-203ENST00000396603 ANKRD36A6QL64 1941 aa16.26■□□□□ 0.19
CLTA-203ENST00000396603 C9orf172C9J069 976 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms