RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 RAD54BQ9Y620 910 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 EVPLQ92817 2033 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 KPNA4O00629 521 aaPredicted RBP9.84□□□□□ -0.83
TRIM39-203ENST00000396547 DYNC1LI2O43237 492 aaPredicted RBP9.84□□□□□ -0.83
TRIM39-203ENST00000396547 NOBOXO60393 691 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 SNAP91O60641 907 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 CLPXO76031 633 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 LDLRP01130 860 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 CPB1P15086 417 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 SHMT2P34897 504 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 NOS2P35228 1153 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 KCNC1P48547 511 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 SPCS2Q15005 226 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 CYBRD1Q53TN4 286 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 GPR158Q5T848 1215 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 NAPEPLDQ6IQ20 393 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 FAM117BQ6P1L5 589 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 SLC2A7Q6PXP3 512 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 C17orf99Q6UX52 265 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 DSG4Q86SJ6 1040 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 Q8N9G6 341 aaPredicted RBP9.84□□□□□ -0.83
TRIM39-203ENST00000396547 ANKRD49Q8WVL7 239 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 NRBF2Q96F24 287 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 GPR20Q99678 358 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 OLFM1Q99784 485 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 KCTD14Q9BQ13 255 aaPredicted RBP9.84□□□□□ -0.83
TRIM39-203ENST00000396547 PDGFCQ9NRA1 345 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 AGPAT4Q9NRZ5 378 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 ATAD3AQ9NVI7 634 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 SLAMF8Q9P0V8 285 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 SPATA7Q9P0W8 599 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 GNPTGQ9UJJ9 305 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 POU2F3Q9UKI9 436 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 TIMM22Q9Y584 194 aa9.84□□□□□ -0.83
TRIM39-203ENST00000396547 MAGEB16A2A368 324 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 A6NL46 340 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 NPHS1O60500 1241 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 SULT1C4O75897 302 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 HGFP14210 728 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 ADRA1BP35368 520 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 PRKAA2P54646 552 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 FOXA1P55317 472 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 TMTC4Q5T4D3 741 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 ANKRD34AQ69YU3 496 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 STRADAQ7RTN6 431 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 ITIH5Q86UX2 942 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 PIM3Q86V86 326 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 ADGRG5Q8IZF4 528 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 TRPV3Q8NET8 790 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 ABHD11Q8NFV4 315 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 NUDT8Q8WV74 236 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 SDCCAG3Q96C92 435 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 C19orf60Q96EN9 201 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 MAELQ96JY0 434 aaKnown RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 FSD1LQ9BXM9 530 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 SEZ6LQ9BYH1 1024 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 GBA3Q9H227 469 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 NANOGQ9H9S0 305 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 GIN1Q9NXP7 522 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 PTBP2Q9UKA9 531 aaKnown RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 CDH7Q9ULB5 785 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 FAM32AQ9Y421 112 aaKnown RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 PIP5K1BO14986 540 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 INHBBP09529 407 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 CCT8P50990 548 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 DIO3P55073 304 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 TPTEP56180 551 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 CLCQ05315 142 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 LIPEQ05469 1076 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 MEP1AQ16819 746 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 UGP2Q16851 508 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 CCNYL2Q5T2Q4 361 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 NEPROQ6NW34 567 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 PKN3Q6P5Z2 889 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 DCLRE1AQ6PJP8 1040 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 R3HCC1LQ7Z5L2 792 aaKnown RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 ZNF354CQ86Y25 554 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 SFRP1Q8N474 314 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 MFSD2AQ8NA29 543 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 ZNF420Q8TAQ5 688 aaPredicted RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 TOP1MTQ969P6 601 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 NSUN5Q96P11 429 aaKnown RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 MIR1-1HGQ9H1L0 117 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 SIAEQ9HAT2 523 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 PLEKHA5Q9HAU0 1116 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 ARMC1Q9NVT9 282 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 HOXC10Q9NYD6 342 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 TSR3Q9UJK0 312 aaKnown RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 ANAPC2Q9UJX6 822 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 PSME2Q9UL46 239 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 BPTFQ12830 3046 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 TTC24A2A3L6 582 aaPredicted RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 OR51F1A6NGY5 319 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 NCF1BA6NI72 391 aaPredicted RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 NCF1CA8MVU1 366 aaPredicted RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 I6L893 689 aaPredicted RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 AGRPO00253 132 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 ACOX3O15254 700 aa9.83□□□□□ -0.84
TRIM39-203ENST00000396547 NCF1P14598 390 aaPredicted RBP9.83□□□□□ -0.84
TRIM39-203ENST00000396547 NAT1P18440 290 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms