RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PARP15Q460N3 678 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 PITRM1Q5JRX3 1037 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 KIAA0895LQ68EN5 471 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 ARHGAP12Q8IWW6 846 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 CFAP52Q8N1V2 620 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 MZB1Q8WU39 189 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 CHMP6Q96FZ7 201 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 PPP1R2P1Q96PQ5 205 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 SSU72Q9NP77 194 aaKnown RBP17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 FBXL12Q9NXK8 326 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 SERGEFQ9UGK8 458 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 PRDM4Q9UKN5 801 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 PCDHGA12O60330 932 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 ATXN1LP0C7T5 689 aaKnown RBP17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 DRD4P21917 467 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 CTSKP43235 329 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 CST6Q15828 149 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 C9orf64Q5T6V5 341 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 ITPRIPL1Q6GPH6 555 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 LRRC8BQ6P9F7 803 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 LGI2Q8N0V4 545 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 SLC44A1Q8WWI5 657 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 EBNA1BP2Q99848 306 aaKnown RBP17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 MPP6Q9NZW5 540 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 ZC3H7BQ9UGR2 993 aaKnown RBP17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 LHX6Q9UPM6 363 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 ERVW-1Q9UQF0 538 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 NCKAP1Q9Y2A7 1128 aa17.56■□□□□ 0.4
TNFSF13-205ENST00000396545 C10orf142B7Z368 130 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 MID1O15344 667 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 RNASEH1O60930 286 aaKnown RBP17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 CLDN11O75508 207 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 SRPRAP08240 638 aaKnown RBP17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 PSMB4P28070 264 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 CTSOP43234 321 aaPredicted RBP17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 CCT8P50990 548 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 RACK1P63244 317 aaKnown RBP17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 TMPRSS7Q7RTY8 843 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 CCDC117Q8IWD4 279 aaPredicted RBP17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 GANCQ8TET4 914 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 SLC39A8Q9C0K1 460 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 TRABDQ9H4I3 376 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 KCNK9Q9NPC2 374 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 ZNF212Q9UDV6 495 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 IGSF10Q6WRI0 2623 aa17.55■□□□□ 0.4
TNFSF13-205ENST00000396545 FASNP49327 2511 aaKnown RBP17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 A0A1W2PPC4 97 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 TTC34A8MYJ7 566 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 H0Y8X5 98 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 DFFAO00273 331 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 MATN3O15232 486 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 RAMP2O60895 175 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 CPP00450 1065 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 GRIA1P42261 906 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 MSH2P43246 934 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 GRK6P43250 576 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 KBTBD12Q3ZCT8 623 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 TEX44Q53QW1 395 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 STEAP4Q687X5 459 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 NCEH1Q6PIU2 408 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 CYS1Q717R9 158 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 SGSM3Q96HU1 749 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 GORASP1Q9BQQ3 440 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 CCDC86Q9H6F5 360 aaKnown RBP17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 SEPT10Q9P0V9 454 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 FZD4Q9ULV1 537 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 PLXNA2O75051 1894 aa17.54■□□□□ 0.4
TNFSF13-205ENST00000396545 EDDM13A0A1B0GTR0 161 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 A0A1B0GVM2 712 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 A0A1W2PP55 124 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 TCAF2A6NFQ2 919 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 FAM47DPA6NHR8 397 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 ERI2A8K979 691 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 KCNK1O00180 336 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 EBAG9O00559 213 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 VILLO15195 856 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 HOXB3P14651 431 aaPredicted RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 KRT15P19012 456 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 OR1E1P30953 314 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 ETFBP38117 255 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 ECT2LQ008S8 904 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 SFSWAPQ12872 951 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 QPCTQ16769 361 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 ALFQ53S48 1182 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 ZNF783Q6ZMS7 281 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 UNC5AQ6ZN44 842 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 PID1Q7Z2X4 250 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 SETD3Q86TU7 594 aaPredicted RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 MMAAQ8IVH4 418 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 KLHDC8BQ8IXV7 354 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 PDCD7Q8N8D1 485 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 DENND1AQ8TEH3 1009 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 CKAP2Q8WWK9 683 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 CFAP36Q96G28 342 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 CELF6Q96J87 481 aaKnown RBP17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 SLC6A18Q96N87 628 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 MAGEH1Q9H213 219 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 GBA3Q9H227 469 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 EBF2Q9HAK2 575 aa17.53■□□□□ 0.4
TNFSF13-205ENST00000396545 NKIRAS1Q9NYS0 192 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms