RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 A0A1W2PPW3 197 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 MATN3O15232 486 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 HSPA8P11142 646 aaKnown RBP14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 ZNF23P17027 643 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 CDK9P50750 372 aaKnown RBP14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 ZNF135P52742 658 aaPredicted RBP14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 TXNL4AP83876 142 aaKnown RBP14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 PFKPQ01813 784 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 KIAA0930Q6ICG6 404 aaPredicted RBP14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 BHLHA9Q7RTU4 235 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 BBS5Q8N3I7 341 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 C12orf43Q96C57 262 aaKnown RBP14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 RPL10LQ96L21 214 aaKnown RBP14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 MRGPRX2Q96LB1 330 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 OSBPL6Q9BZF3 934 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 PNPLA3Q9NST1 481 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 TREX1Q9NSU2 369 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 FAIMQ9NVQ4 179 aa14.05□□□□□ -0.16
CCHCR1-203ENST00000396268 HHLA1C9JL84 531 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 NR5A2O00482 541 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 HTRA2O43464 458 aaPredicted RBP14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 CACNG3O60359 315 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 SLC4A1P02730 911 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 ITGB1P05556 798 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 RBP1P09455 135 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 CD247P20963 164 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 YAP1P46937 504 aaKnown RBP14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 WNT3AP56704 352 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 TRAP1Q12931 704 aaKnown RBP14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 C6orf10Q5SRN2 563 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 GPR158Q5T848 1215 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 HMBOX1Q6NT76 420 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 CARM1Q86X55 608 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 SCAMP5Q8TAC9 235 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 IL12RB2Q99665 862 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 SOX17Q9H6I2 414 aaPredicted RBP14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 EGFL7Q9UHF1 273 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 PADI4Q9UM07 663 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 MTF2Q9Y483 593 aaPredicted RBP14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 PAGE1O75459 146 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 ATE1O95260 518 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 THP07101 528 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 MAXP61244 160 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 BNIP3Q12983 259 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 DSC3Q14574 896 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 PSMD5Q16401 504 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 GPR141Q7Z602 305 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 ZNF354CQ86Y25 554 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 LINC01599Q8WXQ3 324 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 TOP1MTQ969P6 601 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 GIMAP2Q9UG22 337 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 TCRBV3S1A0A5B6 114 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 H3BNH8 94 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 SOCS2O14508 198 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 UBFD1O14562 309 aaKnown RBP14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 ADRA1AP35348 466 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 PSMD8P48556 350 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 HECTD2Q5U5R9 776 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 BORAQ6PGQ7 559 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 OFCC1Q8IZS5 231 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 NAT16Q8N8M0 369 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 PTCD2Q8WV60 388 aaKnown RBP14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 LRCH3Q96II8 777 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 FCRL2Q96LA5 508 aaPredicted RBP14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 DEFB118Q96PH6 123 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 CATSPERBQ9H7T0 1116 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 PLGRKTQ9HBL7 147 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 MRGBPQ9NV56 204 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 CD300AQ9UGN4 299 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 DSEQ9UL01 958 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 CRYL1Q9Y2S2 319 aa14.04□□□□□ -0.16
CCHCR1-203ENST00000396268 SH3PXD2BA1X283 911 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 ZBTB11O95625 1053 aaPredicted RBP14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 BRCC3P46736 316 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 CLCN2P51788 898 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 ATN1P54259 1190 aaPredicted RBP14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 FGD3Q5JSP0 725 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 TBCELQ5QJ74 424 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 C16orf87Q6PH81 154 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 RANBP10Q6VN20 620 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 NCCRP1Q6ZVX7 275 aaPredicted RBP14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 PIM3Q86V86 326 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 SLAIN1Q8ND83 568 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 OR52K2Q8NGK3 314 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 ISOC1Q96CN7 298 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 C3orf30Q96M34 536 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 PRKD2Q9BZL6 878 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 TRIM8Q9BZR9 551 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 TMEM181Q9P2C4 612 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 CDH9Q9ULB4 789 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 PTGDR2Q9Y5Y4 395 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 TSC2P49815 1807 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 ANKRD12Q6UB98 2062 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 CAPN15O75808 1086 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 ATP6V1B2P21281 511 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 KCNC1P48547 511 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 PRKCQQ04759 706 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 NEDD8Q15843 81 aa14.03□□□□□ -0.16
CCHCR1-203ENST00000396268 VPS26BQ4G0F5 336 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms