RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 RNF111Q6ZNA4 994 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 ANKRD33Q7Z3H0 272 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 GLT6D1Q7Z4J2 308 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 RMDN1Q96DB5 314 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 MARK4Q96L34 752 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 ATOH8Q96SQ7 321 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 RNF38Q9H0F5 515 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 UNC93B1Q9H1C4 597 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 SYTL2Q9HCH5 934 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 GEMIN8Q9NWZ8 242 aaKnown RBP16.77■□□□□ 0.27
NUP50-202ENST00000396096 A6NHS1 94 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 C2orf81A6NN90 581 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 FGF4P08620 206 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 MTHFD2P13995 350 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 CD9P21926 228 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 ERFP50548 548 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 ATP4BP51164 291 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 CCL23P55773 120 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 PDAP1Q13442 181 aaKnown RBP16.76■□□□□ 0.27
NUP50-202ENST00000396096 MAPRE2Q15555 327 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 RNF219Q5W0B1 726 aaPredicted RBP16.76■□□□□ 0.27
NUP50-202ENST00000396096 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.76■□□□□ 0.27
NUP50-202ENST00000396096 HERC6Q8IVU3 1022 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 EFCAB3Q8N7B9 438 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 OR4K2Q8NGD2 314 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 ECSITQ9BQ95 431 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 DERL2Q9GZP9 239 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 WDR41Q9HAD4 459 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 PAK6Q9NQU5 681 aaPredicted RBP16.76■□□□□ 0.27
NUP50-202ENST00000396096 ZDHHC7Q9NXF8 308 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 VPS9D1Q9Y2B5 631 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 MED16Q9Y2X0 877 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 H3BNX3 289 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 CBX4O00257 560 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 CASQ2O14958 399 aaPredicted RBP16.76■□□□□ 0.27
NUP50-202ENST00000396096 UBDO15205 165 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 SUPT7LO94864 414 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 CD160O95971 181 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 LPOP22079 712 aaPredicted RBP16.76■□□□□ 0.27
NUP50-202ENST00000396096 ALDH1A3P47895 512 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 ARF5P84085 180 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 XIAPP98170 497 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 OR4D1Q15615 310 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 GSTA3Q16772 222 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 UGT3A2Q3SY77 523 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 SETMARQ53H47 684 aaPredicted RBP16.76■□□□□ 0.27
NUP50-202ENST00000396096 CYHR1Q6ZMK1 362 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 RPS27LQ71UM5 84 aaKnown RBP16.76■□□□□ 0.27
NUP50-202ENST00000396096 RAB44Q7Z6P3 723 aaPredicted RBP16.76■□□□□ 0.27
NUP50-202ENST00000396096 HMGCLL1Q8TB92 370 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 ZNF296Q8WUU4 475 aaPredicted RBP16.76■□□□□ 0.27
NUP50-202ENST00000396096 WBP2Q969T9 261 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 KIAA1191Q96A73 305 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 MIEF2Q96C03 454 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 CDRT15Q96T59 188 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 TAS2R13Q9NYV9 303 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 BCAP29Q9UHQ4 241 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 RAI2Q9Y5P3 530 aa16.76■□□□□ 0.27
NUP50-202ENST00000396096 LCHNA4D1U4 455 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 H3BMM5 538 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 KERAO60938 352 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 PSMD8P48556 350 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 THOP1P52888 689 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 ATP6V0D1P61421 351 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 CDC16Q13042 620 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 PLD1Q13393 1074 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 ART3Q13508 389 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 IZUMO2Q6UXV1 221 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 LARP4Q71RC2 724 aaKnown RBP eCLIP16.75■□□□□ 0.27
NUP50-202ENST00000396096 CLYBLQ8N0X4 340 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 PTGR2Q8N8N7 351 aaPredicted RBP16.75■□□□□ 0.27
NUP50-202ENST00000396096 EXOC2Q96KP1 924 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 HERC2P3Q9BVR0 1158 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 ADGRE3Q9BY15 652 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 VCX3BQ9H321 246 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 SARDHQ9UL12 918 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 OGDHLQ9ULD0 1010 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 FIS1Q9Y3D6 152 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 OAS3Q9Y6K5 1087 aaKnown RBP16.75■□□□□ 0.27
NUP50-202ENST00000396096 KIAA1671Q9BY89 1806 aa16.75■□□□□ 0.27
NUP50-202ENST00000396096 CCDC189A1A4V9 331 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 C2orf78A6NCI8 922 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 H7C0S8 307 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 GFRA2O00451 464 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 TSPAN3O60637 253 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 RHOBTB1O94844 696 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 PDHA1P08559 390 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 PRSS56P0CW18 603 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 STX5Q13190 355 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 CEACAM7Q14002 265 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 RAB33AQ14088 237 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 VEPH1Q14D04 833 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 TAF12Q16514 161 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 INO80DQ53TQ3 878 aaPredicted RBP16.74■□□□□ 0.27
NUP50-202ENST00000396096 NCEH1Q6PIU2 408 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 MFN1Q8IWA4 741 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 LPCAT1Q8NF37 534 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 STAG3L4Q8TBR4 150 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 ZFRQ96KR1 1074 aaKnown RBP16.74■□□□□ 0.27
NUP50-202ENST00000396096 MUC3BQ9H195 1237 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms