RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CCDC70Q6NSX1 233 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 DRICH1Q6PGQ1 229 aaPredicted RBP16.54■□□□□ 0.24
CXCL1-201ENST00000395761 LYSMD3Q7Z3D4 306 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 APOL2Q9BQE5 337 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 ABCG8Q9H221 673 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 MAGEE1Q9HCI5 957 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 TM7SF3Q9NS93 570 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 DLL3Q9NYJ7 618 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 DRG1Q9Y295 367 aaKnown RBP16.54■□□□□ 0.24
CXCL1-201ENST00000395761 AAR2Q9Y312 384 aaKnown RBP16.54■□□□□ 0.24
CXCL1-201ENST00000395761 TMEM131Q92545 1883 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 SPTY2D1-AS1A0A0U1RR47 76 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 DCDC2BA2VCK2 349 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 AURKAO14965 403 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 ZNF883P0CG24 379 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 YPEL5P62699 121 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 BNIP3Q12983 259 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 MTM1Q13496 603 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 WHAMMP3Q1A5X7 153 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 P3H1Q32P28 736 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 ESRP1Q6NXG1 681 aaKnown RBP16.53■□□□□ 0.24
CXCL1-201ENST00000395761 PNCKQ6P2M8 343 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 RANBP10Q6VN20 620 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 DCP2Q8IU60 420 aaKnown RBP16.53■□□□□ 0.24
CXCL1-201ENST00000395761 SCAMP4Q969E2 229 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 APOOQ9BUR5 198 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 AP1M1Q9BXS5 423 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 KLF15Q9UIH9 416 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 PNMA8BQ9ULN7 279 aaPredicted RBP16.53■□□□□ 0.24
CXCL1-201ENST00000395761 ZNF711Q9Y462 761 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 MRFAP1Q9Y605 127 aa16.53■□□□□ 0.24
CXCL1-201ENST00000395761 SPTBN4Q9H254 2564 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 DFNA5O60443 496 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 USP12O75317 370 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 SLC4A1P02730 911 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 ZSCAN5DPP0CG00 497 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 HLA-DPA1P20036 260 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 ID4P47928 161 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 RXRGP48443 463 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 CCT8P50990 548 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 THOP1P52888 689 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 EIF2B5Q13144 721 aaKnown RBP16.52■□□□□ 0.24
CXCL1-201ENST00000395761 SLC14A1Q13336 389 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 DNTTIP2Q5QJE6 756 aaKnown RBP16.52■□□□□ 0.24
CXCL1-201ENST00000395761 KCTD11Q693B1 232 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.24
CXCL1-201ENST00000395761 TMC3Q7Z5M5 1100 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 GATAD2AQ86YP4 633 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 KLHDC8BQ8IXV7 354 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 FUBP1Q96AE4 644 aaKnown RBP16.52■□□□□ 0.24
CXCL1-201ENST00000395761 AGAP2Q99490 1192 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 RTKNQ9BST9 563 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 RIOK2Q9BVS4 552 aaKnown RBP16.52■□□□□ 0.24
CXCL1-201ENST00000395761 LGR4Q9BXB1 951 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 FSD1LQ9BXM9 530 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 ZFYVE1Q9HBF4 777 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 HOMER3Q9NSC5 361 aa16.52■□□□□ 0.24
CXCL1-201ENST00000395761 GOLGA6CA6NDK9 693 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 GOLGA6BA6NDN3 693 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 PDE2AO00408 941 aaPredicted RBP16.51■□□□□ 0.23
CXCL1-201ENST00000395761 SH3BP5O60239 455 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 SDC3O75056 442 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 GOLGA6DP0CG33 693 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 SDHBP21912 280 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 RPL22P35268 128 aaKnown RBP16.51■□□□□ 0.23
CXCL1-201ENST00000395761 TRIM23P36406 574 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 TNNT3P45378 269 aaPredicted RBP16.51■□□□□ 0.23
CXCL1-201ENST00000395761 SPINT3P49223 89 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 ARRB1P49407 418 aaPredicted RBP16.51■□□□□ 0.23
CXCL1-201ENST00000395761 CYP1B1Q16678 543 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 KCTD16Q68DU8 428 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 DENND5AQ6IQ26 1287 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 DBX2Q6ZNG2 339 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 PIP4P1Q86T03 277 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 PDCD7Q8N8D1 485 aaKnown RBP16.51■□□□□ 0.23
CXCL1-201ENST00000395761 CCDC89Q8N998 374 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 CCHCR1Q8TD31 782 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 SAP25Q8TEE9 199 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 AP2M1Q96CW1 435 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 CAPZA3Q96KX2 299 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 CAMK1GQ96NX5 476 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 GPR63Q9BZJ6 419 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 ETNK1Q9HBU6 452 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 DNAJC28Q9NX36 388 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 KCTD5Q9NXV2 234 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 GOLGA6AQ9NYA3 693 aa16.51■□□□□ 0.23
CXCL1-201ENST00000395761 ASCC3Q8N3C0 2202 aaKnown RBP16.51■□□□□ 0.23
CXCL1-201ENST00000395761 DNAH14Q0VDD8 3507 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 TP53BP1Q12888 1972 aaPredicted RBP16.5■□□□□ 0.23
CXCL1-201ENST00000395761 TOR1BO14657 336 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 PCDHGA12O60330 932 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 SOD1P00441 154 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 FGF1P05230 155 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 EPHA8P29322 1005 aaPredicted RBP16.5■□□□□ 0.23
CXCL1-201ENST00000395761 CKAP4Q07065 602 aaKnown RBP16.5■□□□□ 0.23
CXCL1-201ENST00000395761 DPTQ07507 201 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 PTK2BQ14289 1009 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 PUM1Q14671 1186 aaKnown RBP eCLIP16.5■□□□□ 0.23
CXCL1-201ENST00000395761 NFATC4Q14934 902 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 RAET1GQ6H3X3 334 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms