RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 GOLGA8TH3BQL2 631 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 INSIG1O15503 277 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 GJB3O75712 270 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 DNAJC8O75937 253 aaPredicted RBP15.13■□□□□ 0.01
SCAF11-204ENST00000395454 FGF3P11487 239 aaPredicted RBP15.13■□□□□ 0.01
SCAF11-204ENST00000395454 ALDH3A1P30838 453 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 RGRP47804 291 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 LEPRP48357 1165 aaKnown RBP15.13■□□□□ 0.01
SCAF11-204ENST00000395454 STK19P49842 368 aaPredicted RBP15.13■□□□□ 0.01
SCAF11-204ENST00000395454 SEPT6Q14141 434 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 CHI3L2Q15782 390 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 SMAD1Q15797 465 aaKnown RBP15.13■□□□□ 0.01
SCAF11-204ENST00000395454 RALGPS1Q5JS13 557 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 UCMAQ8WVF2 138 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 SHDQ96IW2 340 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 NSMCE3Q96MG7 304 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 NUDCD1Q96RS6 583 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 CINPQ9BW66 212 aaPredicted RBP15.13■□□□□ 0.01
SCAF11-204ENST00000395454 KCNK13Q9HB14 408 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 NOD2Q9HC29 1040 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 ZDHHC4Q9NPG8 344 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 COPG2Q9UBF2 871 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 SLC25A13Q9UJS0 675 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 FBXO5Q9UKT4 447 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 PLA2G4CQ9UP65 541 aa15.13■□□□□ 0.01
SCAF11-204ENST00000395454 TTC24A2A3L6 582 aaPredicted RBP15.12■□□□□ 0.01
SCAF11-204ENST00000395454 CCDC78A2IDD5 438 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 K7EQS6 105 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 STK25O00506 426 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 DCTN3O75935 186 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 UBOX5O94941 541 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 MT-CO1P00395 513 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 SLC35E2BP0CK96 405 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 SKIV2L2P42285 1042 aaKnown RBP15.12■□□□□ 0.01
SCAF11-204ENST00000395454 ZXDAP98168 799 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 THOC5Q13769 683 aaKnown RBP15.12■□□□□ 0.01
SCAF11-204ENST00000395454 FASTKD1Q53R41 847 aaKnown RBP15.12■□□□□ 0.01
SCAF11-204ENST00000395454 ZNF470Q6ECI4 717 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 KDELC2Q7Z4H8 507 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 PLD6Q8N2A8 252 aaKnown RBP15.12■□□□□ 0.01
SCAF11-204ENST00000395454 BRSK1Q8TDC3 778 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 SCG3Q8WXD2 468 aaKnown RBP15.12■□□□□ 0.01
SCAF11-204ENST00000395454 EZH1Q92800 747 aaPredicted RBP15.12■□□□□ 0.01
SCAF11-204ENST00000395454 IFT43Q96FT9 208 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 TDRD1Q9BXT4 1180 aaKnown RBP15.12■□□□□ 0.01
SCAF11-204ENST00000395454 CHKBQ9Y259 395 aa15.12■□□□□ 0.01
SCAF11-204ENST00000395454 APOA4P06727 396 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 GRK2P25098 689 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 CD151P48509 253 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 TMPRSS15P98073 1019 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 MPP1Q00013 466 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 CTBP1Q13363 440 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 UBXN2BQ14CS0 331 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 DLG2Q15700 870 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 C16orf46Q6P387 395 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 CILP2Q8IUL8 1156 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 GPR150Q8NGU9 434 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 RDH11Q8TC12 318 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 CAB39LQ9H9S4 337 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 NPHS2Q9NP85 383 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 THAP1Q9NVV9 213 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 ERVW-1Q9UQF0 538 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 MRPS17Q9Y2R5 130 aaKnown RBP15.11■□□□□ 0.01
SCAF11-204ENST00000395454 KANSL1LA0AUZ9 987 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 DCXO43602 365 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 PRLP01236 227 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 ASLP04424 464 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 CRABP2P29373 138 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 TIE1P35590 1138 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 NNMTP40261 264 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 TNFRSF4P43489 277 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 STARD6P59095 220 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 RAB10P61026 200 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 ST8SIA6P61647 398 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 POU4F1Q01851 419 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 SF3A3Q12874 501 aaKnown RBP eCLIP15.11■□□□□ 0.01
SCAF11-204ENST00000395454 CCINQ13939 588 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 PTPRNQ16849 979 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 ACCSLQ4AC99 568 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 C2orf27AQ580R0 203 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 EGFLAMQ63HQ2 1017 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 TMEM151AQ8N4L1 468 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 ZNF513Q8N8E2 541 aaPredicted RBP15.11■□□□□ 0.01
SCAF11-204ENST00000395454 ATXN7L3BQ96GX2 97 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 SIKE1Q9BRV8 207 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 FOXQ1Q9C009 403 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.11■□□□□ 0.019e-6■■■■□ 19.7
SCAF11-204ENST00000395454 LHX3Q9UBR4 397 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 SLCO3A1Q9UIG8 710 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 SLC39A10Q9ULF5 831 aa15.11■□□□□ 0.01
SCAF11-204ENST00000395454 FAM95CA0A1B0GW59 222 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 G3V2L1 256 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 K7ERQ8 282 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 DNAJC6O75061 913 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 TMCC1O94876 653 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 SERPINE1P05121 402 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 F7P08709 466 aaPredicted RBP15.1■□□□□ 0.01
SCAF11-204ENST00000395454 ABCG1P45844 678 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 LIG3P49916 1009 aa15.1■□□□□ 0.01
SCAF11-204ENST00000395454 CLCN5P51795 746 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms