RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 RPL10LQ96L21 214 aaKnown RBP19.3■□□□□ 0.68
LMNB1-202ENST00000395354 SLCO1B3Q9NPD5 702 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 HACD3Q9P035 362 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.3■□□□□ 0.68
LMNB1-202ENST00000395354 SLC25A13Q9UJS0 675 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 TLK1Q9UKI8 766 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 EMCNQ9ULC0 261 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 SLC39A10Q9ULF5 831 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 ERVW-1Q9UQF0 538 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 KANSL1LA0AUZ9 987 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 ANTXRLA6NF34 631 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 DCXO43602 365 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 PROCP04070 461 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 APOA4P06727 396 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 CRABP2P29373 138 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 CLCN5P51795 746 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 RPL26P61254 145 aaKnown RBP19.29■□□□□ 0.68
LMNB1-202ENST00000395354 POU4F1Q01851 419 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 PTPRNQ16849 979 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 TAF1BQ53T94 588 aaPredicted RBP19.29■□□□□ 0.68
LMNB1-202ENST00000395354 PPM1JQ5JR12 505 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 OTOAQ7RTW8 1153 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 CILP2Q8IUL8 1156 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 ZNF398Q8TD17 642 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 NELL2Q99435 816 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 TSSK1BQ9BXA7 367 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 NLE1Q9NVX2 485 aaPredicted RBP19.29■□□□□ 0.68
LMNB1-202ENST00000395354 SLCO3A1Q9UIG8 710 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 HCN2Q9UL51 889 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 RPL26L1Q9UNX3 145 aaKnown RBP19.29■□□□□ 0.68
LMNB1-202ENST00000395354 FCF1Q9Y324 198 aaKnown RBP19.29■□□□□ 0.68
LMNB1-202ENST00000395354 PCDHGC4Q9Y5F7 938 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 ATG2BQ96BY7 2078 aa19.29■□□□□ 0.68
LMNB1-202ENST00000395354 FAM95CA0A1B0GW59 222 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 C2orf81A6NN90 581 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 ANKRD66B4E2M5 251 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 STK25O00506 426 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 FZD6O60353 706 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 TGDSO95455 350 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 SRPRAP08240 638 aaKnown RBP19.28■□□□□ 0.68
LMNB1-202ENST00000395354 BGNP21810 368 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 NNMTP40261 264 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 STK19P49842 368 aaPredicted RBP19.28■□□□□ 0.68
LMNB1-202ENST00000395354 ZNF140P52738 457 aaPredicted RBP19.28■□□□□ 0.68
LMNB1-202ENST00000395354 SEC13P55735 322 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 SIGLEC14Q08ET2 396 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 TRAF2Q12933 501 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 CCDC91Q7Z6B0 441 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 OR6P1Q8NGX9 317 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 ISG20Q96AZ6 181 aaKnown RBP19.28■□□□□ 0.68
LMNB1-202ENST00000395354 MRGPRX3Q96LB0 322 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 KLHL14Q9P2G3 628 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 MID2Q9UJV3 735 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 CORO1CQ9ULV4 474 aaPredicted RBP19.28■□□□□ 0.68
LMNB1-202ENST00000395354 HS3ST2Q9Y278 367 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 MTF2Q9Y483 593 aaPredicted RBP19.28■□□□□ 0.68
LMNB1-202ENST00000395354 ARL5AQ9Y689 179 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 TRIOO75962 3097 aa19.28■□□□□ 0.68
LMNB1-202ENST00000395354 CCT8L1PA6NM43 557 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 K7ERQ8 282 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 GSRP00390 522 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 TROVE2P10155 538 aaKnown RBP eCLIP19.27■□□□□ 0.68
LMNB1-202ENST00000395354 STMN1P16949 149 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 KIR2DL1P43626 348 aaPredicted RBP19.27■□□□□ 0.68
LMNB1-202ENST00000395354 ARSDP51689 593 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 RAB10P61026 200 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 ST8SIA6P61647 398 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 CCINQ13939 588 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 UBXN2BQ14CS0 331 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 FBXO43Q4G163 708 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 C2orf27AQ580R0 203 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 MRNIPQ6NTE8 343 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 CCDC63Q8NA47 563 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 LPCAT1Q8NF37 534 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 KCNV2Q8TDN2 545 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 DNAJC1Q96KC8 554 aaKnown RBP19.27■□□□□ 0.68
LMNB1-202ENST00000395354 C7orf26Q96N11 449 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 TSNARE1Q96NA8 513 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 KDM4CQ9H3R0 1056 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 CAB39LQ9H9S4 337 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 TBC1D17Q9HA65 648 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 LTB4R2Q9NPC1 389 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 TMEM216Q9P0N5 145 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 THAP10Q9P2Z0 257 aaPredicted RBP19.27■□□□□ 0.68
LMNB1-202ENST00000395354 KCTD3Q9Y597 815 aa19.27■□□□□ 0.68
LMNB1-202ENST00000395354 FAM170BA6NMN3 283 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 SMAD6O43541 496 aaKnown RBP19.27■□□□□ 0.67
LMNB1-202ENST00000395354 SOCS5O75159 536 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 HAUS5O94927 633 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 PRKCGP05129 697 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 PDHA1P08559 390 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 HNRNPLP14866 589 aaKnown RBP eCLIP19.27■□□□□ 0.67
LMNB1-202ENST00000395354 OGNP20774 298 aaKnown RBP19.27■□□□□ 0.67
LMNB1-202ENST00000395354 TARSP26639 723 aaKnown RBP19.27■□□□□ 0.67
LMNB1-202ENST00000395354 TIE1P35590 1138 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 ABCG1P45844 678 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 GRIA4P48058 902 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 ZNF234Q14588 700 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 E2F5Q15329 346 aa19.27■□□□□ 0.67
LMNB1-202ENST00000395354 ACCSLQ4AC99 568 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms