RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 TTC23Q5W5X9 447 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 ANGPTL8Q6UXH0 198 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 TMCO5AQ8N6Q1 288 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 CDYL2Q8N8U2 506 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 OR9I1Q8NGQ6 314 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 UROC1Q96N76 676 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 ADAMTS10Q9H324 1103 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF696Q9H7X3 374 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 POLR2AP24928 1970 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 C1orf232A0A0U1RR37 186 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 BTBD19C9JJ37 291 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 CBX4O00257 560 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 SULT2A1Q06520 285 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 LCP2Q13094 533 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 MAP2K5Q13163 448 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 MTA1Q13330 715 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 TUSC3Q13454 348 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 TTLL9Q3SXZ7 439 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 BROXQ5VW32 411 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 TXNDC11Q6PKC3 985 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 MAVSQ7Z434 540 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 C8orf59Q8N0T1 100 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 SNX19Q92543 992 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 TSGA13Q96PP4 275 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC39A3Q9BRY0 314 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 SMPD3Q9NY59 655 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 UBXN8O00124 270 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 RAD51BO15315 384 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 HIST1H2AGP0C0S8 130 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 HIST1H2ADP20671 130 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 EPS8Q12929 822 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 TIGD5Q53EQ6 642 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 SDHAF4Q5VUM1 108 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 DNAJC14Q6Y2X3 702 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 ARRDC4Q8NCT1 418 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 SCAMP5Q8TAC9 235 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 HIST1H2AHQ96KK5 128 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 HIST1H2AJQ99878 128 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 H2AFJQ9BTM1 129 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 MRM3Q9HC36 420 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 ATP13A1Q9HD20 1204 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 CRLS1Q9UJA2 301 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 SIPA1L1O43166 1804 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 KDM1AO60341 852 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 CNMDO75829 334 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 PGK1P00558 417 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 MSH3P20585 1137 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 CD68P34810 354 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 HERVK_113P63132 956 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 CLCQ05315 142 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 MAD2L1Q13257 205 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 BFSP2Q13515 415 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 ATP1A4Q13733 1029 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 UGT2A3Q6UWM9 527 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 CXCL17Q6UXB2 119 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 ERI1Q8IV48 349 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 EID3Q8N140 333 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 PACRGLQ8N7B6 248 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 SPPL2BQ8TCT7 592 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 FAM120BQ96EK7 910 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 HMCESQ96FZ2 354 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 ERVK-6Q9BXR3 956 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 ALG2Q9H553 416 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 CIDEBQ9UHD4 219 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 TIMM22Q9Y584 194 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 TNPO3Q9Y5L0 923 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 EVPLQ92817 2033 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 KLHL33A6NCF5 533 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 C9IYK1 514 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 GABRDO14764 452 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 FKBP9O95302 570 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 IRF1P10914 325 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 NDST2P52849 883 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 GJA9P57773 515 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 LIPEQ05469 1076 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 VAC14Q08AM6 782 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 FAM110CQ1W6H9 321 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 CCDC81Q6ZN84 652 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 ARHGAP36Q6ZRI8 547 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 FKBP9P1Q75LS8 142 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 MILR1Q7Z6M3 343 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 PROSER1Q86XN7 944 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 PLD3Q8IV08 490 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 CEP97Q8IW35 865 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 KDM1BQ8NB78 822 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 EMID1Q96A84 441 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 AKTIPQ9H8T0 292 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF229Q9UJW7 825 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 VPS28Q9UK41 221 aa11.65□□□□□ -0.54
UBE2D3-209ENST00000394804 MYOCOSA0A1B0GUC4 107 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 ARL5CA6NH57 179 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 OCM2P0CE71 109 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 OCMP0CE72 109 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 RPS9P46781 194 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 MS4A2Q01362 244 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 TECRLQ5HYJ1 363 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 NOMO2Q5JPE7 1267 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 RPS27LQ71UM5 84 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 HOMEZQ8IX15 550 aa11.64□□□□□ -0.55
UBE2D3-209ENST00000394804 LEMD2Q8NC56 503 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms