RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 ZNF461Q8TAF7 563 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 GATA6Q92908 595 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 MARK4Q96L34 752 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 CLSTN3Q9BQT9 956 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 TDRD1Q9BXT4 1180 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 TRPM5Q9NZQ8 1165 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 ADAMTS6Q9UKP5 1117 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 CASQ2O14958 399 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 SUPT7LO94864 414 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 RHOCP08134 193 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 FGF4P08620 206 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 MTHFD2P13995 350 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 PMLP29590 882 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 CORO1AP31146 461 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 XIAPP98170 497 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 ART3Q13508 389 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 PTK2BQ14289 1009 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 SQLEQ14534 574 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 CYHR1Q6ZMK1 362 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 MDGA1Q8NFP4 955 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 IGSF21Q96ID5 467 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 WDR41Q9HAD4 459 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 SYTL2Q9HCH5 934 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 GKN1Q9NS71 199 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 AGO1Q9UL18 857 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 SLC4A1P02730 911 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 SGSHP51688 502 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 THOP1P52888 689 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 PRMT2P55345 433 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 UGT3A2Q3SY77 523 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 SETMARQ53H47 684 aaPredicted RBP15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 AFTPHQ6ULP2 937 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 LARP4Q71RC2 724 aaKnown RBP eCLIP15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 HMGCLL1Q8TB92 370 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 LPGAT1Q92604 370 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 RMDN1Q96DB5 314 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 TRMT2BQ96GJ1 504 aaKnown RBP15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 SCLYQ96I15 445 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 NR1H4Q96RI1 486 aaPredicted RBP15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 ATOH8Q96SQ7 321 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 KLF16Q9BXK1 252 aaPredicted RBP15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 RNF38Q9H0F5 515 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 SCUBE2Q9NQ36 999 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 STOML2Q9UJZ1 356 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 MED16Q9Y2X0 877 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 UBDO15205 165 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 DPP6P42658 865 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 PSMD8P48556 350 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 STX5Q13190 355 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 CEACAM7Q14002 265 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 MAPRE2Q15555 327 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 AP1ARQ63HQ0 302 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 TPGS2Q68CL5 300 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 CXorf57Q6NSI4 855 aaKnown RBP15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 CLYBLQ8N0X4 340 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 OR4K2Q8NGD2 314 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 UCMAQ8WVF2 138 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 DERL2Q9GZP9 239 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 VCX3BQ9H321 246 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 BCAP29Q9UHQ4 241 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 FIS1Q9Y3D6 152 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 SCN5AQ14524 2016 aa15.31■□□□□ 0.04
UBE2D3-207ENST00000394801 C2orf81A6NN90 581 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 H3BMM5 538 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 PARNO95453 639 aaKnown RBP15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 RAG1P15918 1043 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 PDAP1Q13442 181 aaKnown RBP15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 OR4D1Q15615 310 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 GLT6D1Q7Z4J2 308 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 PDSS2Q86YH6 399 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 KIAA1191Q96A73 305 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 TSC22D3Q99576 134 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 MRPL1Q9BYD6 325 aaKnown RBP15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 PPP1R12CQ9BZL4 782 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 SARDHQ9UL12 918 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 PSMD13Q9UNM6 376 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 ANKRD36A6QL64 1941 aa15.3■□□□□ 0.04
UBE2D3-207ENST00000394801 LCHNA4D1U4 455 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 PSMD12O00232 456 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 PEX1O43933 1283 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 CD160O95971 181 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 PRSS56P0CW18 603 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 ENO3P13929 434 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 XRCC1P18887 633 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 CD9P21926 228 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 ME2P23368 584 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 PPP3CCP48454 512 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 ATP4BP51164 291 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 SH3BP2P78314 561 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 PPP1R3AQ16821 1122 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 SLC30A9Q6PML9 568 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 ZNF783Q6ZMS7 281 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 PTGR2Q8N8N7 351 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 HIPK4Q8NE63 616 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 EXOC2Q96KP1 924 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 KLHL4Q9C0H6 718 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 TAS2R13Q9NYV9 303 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 RAI2Q9Y5P3 530 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 ANKRD33BA6NCL7 494 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 ANKRD66B4E2M5 251 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms