RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 POU5F2Q8N7G0 328 aa20.33■□□□□ 0.85
PRKCD-202ENST00000394729 MRM3Q9HC36 420 aaKnown RBP20.33■□□□□ 0.85
PRKCD-202ENST00000394729 BIRC5O15392 142 aa20.33■□□□□ 0.84
PRKCD-202ENST00000394729 RHOBTB1O94844 696 aa20.33■□□□□ 0.84
PRKCD-202ENST00000394729 LPOP22079 712 aaPredicted RBP20.33■□□□□ 0.84
PRKCD-202ENST00000394729 ZNF140P52738 457 aaPredicted RBP20.33■□□□□ 0.84
PRKCD-202ENST00000394729 CDH13P55290 713 aa20.33■□□□□ 0.84
PRKCD-202ENST00000394729 DPY19L3Q6ZPD9 716 aa20.33■□□□□ 0.84
PRKCD-202ENST00000394729 PACS2Q86VP3 889 aa20.33■□□□□ 0.84
PRKCD-202ENST00000394729 SFTPA1Q8IWL2 248 aa20.33■□□□□ 0.84
PRKCD-202ENST00000394729 TRIM42Q8IWZ5 723 aa20.33■□□□□ 0.84
PRKCD-202ENST00000394729 SLC30A3Q99726 388 aa20.33■□□□□ 0.84
PRKCD-202ENST00000394729 EBF3Q9H4W6 596 aa20.33■□□□□ 0.84
PRKCD-202ENST00000394729 SKAP2O75563 359 aaPredicted RBP20.32■□□□□ 0.84
PRKCD-202ENST00000394729 KRT16P08779 473 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 SRCP12931 536 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 CD1EP15812 388 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 PDAP1Q13442 181 aaKnown RBP20.32■□□□□ 0.84
PRKCD-202ENST00000394729 GEN1Q17RS7 908 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 MAPK15Q8TD08 544 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 SP7Q8TDD2 431 aaPredicted RBP20.32■□□□□ 0.84
PRKCD-202ENST00000394729 STYXQ8WUJ0 223 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 FATE1Q969F0 183 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 C7orf26Q96N11 449 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 NUF2Q9BZD4 464 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 ARHGAP26Q9UNA1 814 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 IRAK3Q9Y616 596 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 ZNF821O75541 412 aaPredicted RBP20.32■□□□□ 0.84
PRKCD-202ENST00000394729 KLHL2O95198 593 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 T-ENOLP0DO92 83 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 CHRM3P20309 590 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 NSUN2Q08J23 767 aaKnown RBP eCLIP20.32■□□□□ 0.84
PRKCD-202ENST00000394729 RFTN1Q14699 578 aaPredicted RBP20.32■□□□□ 0.84
PRKCD-202ENST00000394729 TMEM215Q68D42 235 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 GET4Q7L5D6 327 aaPredicted RBP20.32■□□□□ 0.84
PRKCD-202ENST00000394729 SDCCAG8Q86SQ7 713 aaPredicted RBP20.32■□□□□ 0.84
PRKCD-202ENST00000394729 WDR75Q8IWA0 830 aaKnown RBP20.32■□□□□ 0.84
PRKCD-202ENST00000394729 PPM1EQ8WY54 764 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 GPR78Q96P69 363 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 BOCQ9BWV1 1114 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 CCDC68Q9H2F9 335 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 TMEM51Q9NW97 253 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 GTSE1Q9NYZ3 720 aa20.32■□□□□ 0.84
PRKCD-202ENST00000394729 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.32■□□□□ 0.84
PRKCD-202ENST00000394729 SIX3O95343 332 aaPredicted RBP20.31■□□□□ 0.84
PRKCD-202ENST00000394729 POU4F1Q01851 419 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 GALNTL6Q49A17 601 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 PAQR3Q6TCH7 311 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 FBXO27Q8NI29 283 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 IRF7Q92985 503 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 IGSF5Q9NSI5 407 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 LOC100653049A0A140TA62 436 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 KRT34O76011 436 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 FSBPO95073 299 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 EPOP01588 193 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 EPHA3P29320 983 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 STC1P52823 247 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 INSCQ1MX18 579 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 LACTB2Q53H82 288 aaPredicted RBP20.31■□□□□ 0.84
PRKCD-202ENST00000394729 DCBLD1Q8N8Z6 715 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 SNX31Q8N9S9 440 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 SIDT2Q8NBJ9 832 aaKnown RBP20.31■□□□□ 0.84
PRKCD-202ENST00000394729 FIBINQ8TAL6 211 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 RSPRY1Q96DX4 576 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 RANBP9Q96S59 729 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 GPR21Q99679 349 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 OXSMQ9NWU1 459 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 PKP3Q9Y446 797 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 MEI4A8MW99 385 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 H3BMM5 538 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 KLF11O14901 512 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 XYLBO75191 536 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 HNF1BP35680 557 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 MAGEA10P43363 369 aaPredicted RBP20.31■□□□□ 0.84
PRKCD-202ENST00000394729 TAF1AQ15573 450 aaPredicted RBP20.31■□□□□ 0.84
PRKCD-202ENST00000394729 FAM83EQ2M2I3 478 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 NXNQ6DKJ4 435 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 ALG1LQ6GMV1 187 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 ISL2Q96A47 359 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 PTERQ96BW5 349 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 PBX4Q9BYU1 374 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 MTIF3Q9H2K0 278 aaKnown RBP20.31■□□□□ 0.84
PRKCD-202ENST00000394729 SPHK2Q9NRA0 654 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 ZNF711Q9Y462 761 aa20.31■□□□□ 0.84
PRKCD-202ENST00000394729 OTOL1A6NHN0 477 aaPredicted RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 EPOPA6NHQ4 379 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 PPP6CO00743 305 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 CCNHP51946 323 aaPredicted RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 SLC9B1Q4ZJI4 515 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 INO80DQ53TQ3 878 aaPredicted RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 RARS2Q5T160 578 aaKnown RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 TREML1Q86YW5 311 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 COG4Q9H9E3 785 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 ACTR5Q9H9F9 607 aaPredicted RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 NLE1Q9NVX2 485 aaPredicted RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 ZDHHC2Q9UIJ5 367 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 NPIPB15A6NHN6 443 aaPredicted RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 TTC34A8MYJ7 566 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 PRR5-ARHGAP8B1AHC4 643 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 GFRA2O00451 464 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms